RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
NOTCH3-202ENST00000595045 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 PRKRIP1Q9H875 184 aaPredicted RBP12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
NOTCH3-202ENST00000595045 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 PDE8AO60658 829 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 USP17L1Q7RTZ2 530 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 MXD3Q9BW11 206 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 TRIM17Q9Y577 477 aa12.59□□□□□ -0.39
NOTCH3-202ENST00000595045 NF2P35240 595 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 OTOP1Q7RTM1 612 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 TXNRD3Q86VQ6 643 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
NOTCH3-202ENST00000595045 WNT10BO00744 389 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 GNAI1P63096 354 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 CCDC152Q4G0S7 254 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 SPRYD7Q5W111 196 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 GREM2Q9H772 168 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 ZNF646O15015 1829 aaPredicted RBP12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 COL6A3P12111 3177 aa12.57□□□□□ -0.4
NOTCH3-202ENST00000595045 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 H7C1W4 665 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 CASP7P55210 303 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 CTSWP56202 376 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 PRKG1Q13976 671 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 CCDC184Q52MB2 194 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 LDLRAD1Q5T700 205 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 G2E3Q7L622 706 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 XDHP47989 1333 aa12.56□□□□□ -0.4
NOTCH3-202ENST00000595045 EN2P19622 333 aaPredicted RBP12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 KLRK1P26718 216 aa12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 CWF19L2Q2TBE0 894 aaKnown RBP12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 OGFOD1Q8N543 542 aa12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 ZBED3Q96IU2 234 aaPredicted RBP12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 IRS2Q9Y4H2 1338 aa12.55□□□□□ -0.4
NOTCH3-202ENST00000595045 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 SASH1O94885 1247 aa12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 ARMC5Q96C12 935 aa12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 PTPN22Q9Y2R2 807 aa12.54□□□□□ -0.4
NOTCH3-202ENST00000595045 LAMB1P07942 1786 aa12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 MANSC4A6NHS7 340 aaPredicted RBP12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 INHBEP58166 350 aa12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 CCDC30Q5VVM6 783 aa12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 CD99L2Q8TCZ2 262 aa12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
NOTCH3-202ENST00000595045 CSF1RP07333 972 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 CCT4P50991 539 aaKnown RBP12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 STRIP1Q5VSL9 837 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 ERO1AQ96HE7 468 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
NOTCH3-202ENST00000595045 LAMA3Q16787 3333 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 SNAP23O00161 211 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 CAP1Q01518 475 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
NOTCH3-202ENST00000595045 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 ZBTB48P10074 688 aaPredicted RBP12.5□□□□□ -0.41
NOTCH3-202ENST00000595045 MMP14P50281 582 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms