RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ECE1P42892 770 aa29.7■■■□□ 2.35
LSM4-204ENST00000594828 KCNJ4P48050 445 aa29.7■■■□□ 2.35
LSM4-204ENST00000594828 ZNF280AP59817 542 aaPredicted RBP29.7■■■□□ 2.35
LSM4-204ENST00000594828 CCDC57Q2TAC2 916 aa29.7■■■□□ 2.35
LSM4-204ENST00000594828 GMLQ99445 158 aa29.7■■■□□ 2.35
LSM4-204ENST00000594828 USP17L8P0C7I0 530 aa29.69■■■□□ 2.34
LSM4-204ENST00000594828 KRT26Q7Z3Y9 468 aa29.69■■■□□ 2.34
LSM4-204ENST00000594828 SSH1Q8WYL5 1049 aa29.69■■■□□ 2.34
LSM4-204ENST00000594828 CAPNS2Q96L46 248 aa29.69■■■□□ 2.34
LSM4-204ENST00000594828 PTPRCP08575 1304 aa29.69■■■□□ 2.34
LSM4-204ENST00000594828 SAPCD2Q86UD0 394 aa29.68■■■□□ 2.34
LSM4-204ENST00000594828 PSME4Q14997 1843 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 KLRK1P26718 216 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 TAF7LQ5H9L4 462 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 CYP4F22Q6NT55 531 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 FBXW7Q969H0 707 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 AIDAQ96BJ3 306 aa29.67■■■□□ 2.34
LSM4-204ENST00000594828 TAF5LO75529 589 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 GRM1Q13255 1194 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 DACT2Q5SW24 774 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 STRIP1Q5VSL9 837 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 DLK2Q6UY11 383 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 HELBQ8NG08 1087 aaPredicted RBP29.66■■■□□ 2.34
LSM4-204ENST00000594828 ZNF594Q96JF6 807 aaPredicted RBP29.66■■■□□ 2.34
LSM4-204ENST00000594828 WBP1LQ9NX94 342 aa29.66■■■□□ 2.34
LSM4-204ENST00000594828 FOXN1O15353 648 aa29.65■■■□□ 2.34
LSM4-204ENST00000594828 NBPF7P0C2Y1 421 aaPredicted RBP29.65■■■□□ 2.34
LSM4-204ENST00000594828 SCARF1Q14162 830 aa29.65■■■□□ 2.34
LSM4-204ENST00000594828 LDHAL6AQ6ZMR3 332 aa29.65■■■□□ 2.34
LSM4-204ENST00000594828 TRMT2AQ8IZ69 625 aaKnown RBP29.65■■■□□ 2.34
LSM4-204ENST00000594828 MYOZ2Q9NPC6 264 aa29.65■■■□□ 2.34
LSM4-204ENST00000594828 MAP2K1Q02750 393 aaPredicted RBP29.64■■■□□ 2.34
LSM4-204ENST00000594828 ALDH1L2Q3SY69 923 aa29.64■■■□□ 2.34
LSM4-204ENST00000594828 SULF1Q8IWU6 871 aa29.64■■■□□ 2.34
LSM4-204ENST00000594828 SUCLG2Q96I99 432 aa29.64■■■□□ 2.34
LSM4-204ENST00000594828 MXD3Q9BW11 206 aa29.64■■■□□ 2.34
LSM4-204ENST00000594828 GGA3Q9NZ52 723 aa29.64■■■□□ 2.34
LSM4-204ENST00000594828 ADM5C9JUS6 153 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 SNAP23O00161 211 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 TTLL5Q6EMB2 1281 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 HHIPL1Q96JK4 782 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 CNNM1Q9NRU3 951 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 UTYO14607 1347 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 ASTN2O75129 1339 aaPredicted RBP29.63■■■□□ 2.33
LSM4-204ENST00000594828 MYO3BQ8WXR4 1341 aa29.63■■■□□ 2.33
LSM4-204ENST00000594828 OGFOD1Q8N543 542 aa29.62■■■□□ 2.33
LSM4-204ENST00000594828 KAZALD1Q96I82 304 aa29.62■■■□□ 2.33
LSM4-204ENST00000594828 POLR2AP24928 1970 aaKnown RBP29.61■■■□□ 2.33
LSM4-204ENST00000594828 ANGEL2Q5VTE6 544 aaKnown RBP29.61■■■□□ 2.33
LSM4-204ENST00000594828 C15orf52Q6ZUT6 534 aaKnown RBP29.61■■■□□ 2.33
LSM4-204ENST00000594828 CD209Q9NNX6 404 aa29.61■■■□□ 2.33
LSM4-204ENST00000594828 PLIN1O60240 522 aa29.6■■■□□ 2.33
LSM4-204ENST00000594828 CTCFP49711 727 aaPredicted RBP29.6■■■□□ 2.33
LSM4-204ENST00000594828 TNS4Q8IZW8 715 aa29.6■■■□□ 2.33
LSM4-204ENST00000594828 GTF2IP78347 998 aa29.59■■■□□ 2.33
LSM4-204ENST00000594828 SMC4Q9NTJ3 1288 aa29.59■■■□□ 2.33
LSM4-204ENST00000594828 IRS2Q9Y4H2 1338 aa29.59■■■□□ 2.33
LSM4-204ENST00000594828 MAP2K2P36507 400 aa29.58■■■□□ 2.33
LSM4-204ENST00000594828 C2orf69Q8N8R5 385 aa29.58■■■□□ 2.33
LSM4-204ENST00000594828 BICC1Q9H694 974 aaKnown RBP29.58■■■□□ 2.33
LSM4-204ENST00000594828 GBA2Q9HCG7 927 aaPredicted RBP29.58■■■□□ 2.33
LSM4-204ENST00000594828 CT47B1P0C2W7 299 aaPredicted RBP29.57■■■□□ 2.32
LSM4-204ENST00000594828 MMP14P50281 582 aa29.57■■■□□ 2.32
LSM4-204ENST00000594828 HUNKP57058 714 aa29.57■■■□□ 2.32
LSM4-204ENST00000594828 AOC2O75106 756 aa29.56■■■□□ 2.32
LSM4-204ENST00000594828 ZNF804AQ7Z570 1209 aa29.56■■■□□ 2.32
LSM4-204ENST00000594828 PITPNM2Q9BZ72 1349 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 NBPF9Q3BBW0 867 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 RABL6Q3YEC7 729 aaPredicted RBP29.55■■■□□ 2.32
LSM4-204ENST00000594828 CDCA5Q96FF9 252 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 BEGAINQ9BUH8 593 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 USP44Q9H0E7 712 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 PRDM10Q9NQV6 1147 aa29.55■■■□□ 2.32
LSM4-204ENST00000594828 KIAA0825Q8IV33 1275 aa29.54■■■□□ 2.32
LSM4-204ENST00000594828 PUS3Q9BZE2 481 aaKnown RBP29.54■■■□□ 2.32
LSM4-204ENST00000594828 HDAC9Q9UKV0 1011 aa29.54■■■□□ 2.32
LSM4-204ENST00000594828 ZNF646O15015 1829 aaPredicted RBP29.53■■■□□ 2.32
LSM4-204ENST00000594828 WNT10BO00744 389 aa29.53■■■□□ 2.32
LSM4-204ENST00000594828 IL1R1P14778 569 aa29.53■■■□□ 2.32
LSM4-204ENST00000594828 ANKRD44Q8N8A2 993 aa29.53■■■□□ 2.32
LSM4-204ENST00000594828 THSD7BQ9C0I4 1608 aa29.53■■■□□ 2.32
LSM4-204ENST00000594828 A0A1B0GUL6 1792 aa29.52■■■□□ 2.32
LSM4-204ENST00000594828 LBX1P52954 281 aa29.52■■■□□ 2.32
LSM4-204ENST00000594828 RIPOR2Q9Y4F9 1068 aa29.52■■■□□ 2.32
LSM4-204ENST00000594828 UBE4AQ14139 1066 aa29.51■■■□□ 2.31
LSM4-204ENST00000594828 RGMBQ6NW40 437 aa29.5■■■□□ 2.31
LSM4-204ENST00000594828 NOB1Q9ULX3 412 aaKnown RBP29.5■■■□□ 2.31
LSM4-204ENST00000594828 SCAF8Q9UPN6 1271 aaKnown RBP29.5■■■□□ 2.31
LSM4-204ENST00000594828 MROH5Q6ZUA9 1318 aa29.49■■■□□ 2.31
LSM4-204ENST00000594828 HSPA8P11142 646 aaKnown RBP29.49■■■□□ 2.31
LSM4-204ENST00000594828 SASH1O94885 1247 aa29.48■■■□□ 2.31
LSM4-204ENST00000594828 NOGQ13253 232 aa29.48■■■□□ 2.31
LSM4-204ENST00000594828 CERS5Q8N5B7 392 aa29.48■■■□□ 2.31
LSM4-204ENST00000594828 BRPF1P55201 1214 aaPredicted RBP29.47■■■□□ 2.31
LSM4-204ENST00000594828 CCDC102AQ96A19 550 aa29.47■■■□□ 2.31
LSM4-204ENST00000594828 ZNF157P51786 506 aaPredicted RBP29.46■■■□□ 2.31
LSM4-204ENST00000594828 FKBP1AP62942 108 aaKnown RBP29.46■■■□□ 2.31
LSM4-204ENST00000594828 LRRC24Q50LG9 513 aa29.46■■■□□ 2.31
LSM4-204ENST00000594828 HIBADHP31937 336 aaKnown RBP29.45■■■□□ 2.31
LSM4-204ENST00000594828 GYG1P46976 350 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms