RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
USE1-204ENST00000594399 CCDC8Q9H0W5 538 aaPredicted RBP13.31□□□□□ -0.28
USE1-204ENST00000594399 TLR7Q9NYK1 1049 aaKnown RBP13.31□□□□□ -0.28
USE1-204ENST00000594399 MED23Q9ULK4 1368 aa13.31□□□□□ -0.28
USE1-204ENST00000594399 SNAP23O00161 211 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 PDE4AP27815 886 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 TIMM10P62072 90 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 C16orf71Q8IYS4 520 aaPredicted RBP13.3□□□□□ -0.28
USE1-204ENST00000594399 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 GPATCH3Q96I76 525 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 DBNDD2Q9BQY9 259 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 DBNLQ9UJU6 430 aaKnown RBP13.3□□□□□ -0.28
USE1-204ENST00000594399 SALL3Q9BXA9 1300 aa13.3□□□□□ -0.28
USE1-204ENST00000594399 FER1L6Q2WGJ9 1857 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 MX1P20591 662 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 ADORA1P30542 326 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 SUPT20HQ8NEM7 779 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
USE1-204ENST00000594399 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 PSMD1Q99460 953 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 RTFDC1Q9BY42 306 aaPredicted RBP13.29□□□□□ -0.28
USE1-204ENST00000594399 POLLQ9UGP5 575 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
USE1-204ENST00000594399 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
USE1-204ENST00000594399 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
USE1-204ENST00000594399 EYA3Q99504 573 aa13.28□□□□□ -0.28
USE1-204ENST00000594399 AOX1Q06278 1338 aa13.28□□□□□ -0.28
USE1-204ENST00000594399 TTC41PQ6P2S7 1318 aa13.28□□□□□ -0.28
USE1-204ENST00000594399 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
USE1-204ENST00000594399 KLRK1P26718 216 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.29
USE1-204ENST00000594399 CAVIN4Q5BKX8 364 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 CCDC158Q5M9N0 1113 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 SKAP1Q86WV1 359 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 PLEKHM2Q8IWE5 1019 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 GPR101Q96P66 508 aaPredicted RBP13.27□□□□□ -0.29
USE1-204ENST00000594399 TAOK3Q9H2K8 898 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 ECHDC1Q9NTX5 307 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 STAP2Q9UGK3 403 aa13.27□□□□□ -0.29
USE1-204ENST00000594399 PHKA1P46020 1223 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 GYG1P46976 350 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 RGS3P49796 1198 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 PDE1AP54750 535 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 TTC39AQ5SRH9 613 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 CCDC102BQ68D86 513 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 ZNF804AQ7Z570 1209 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 VPS37DQ86XT2 251 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 ZC3H12CQ9C0D7 883 aaKnown RBP13.26□□□□□ -0.29
USE1-204ENST00000594399 LTBP3Q9NS15 1303 aa13.26□□□□□ -0.29
USE1-204ENST00000594399 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 NFKBIEO00221 500 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 ERC2O15083 957 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
USE1-204ENST00000594399 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
USE1-204ENST00000594399 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 FAM84BQ96KN1 310 aaPredicted RBP13.25□□□□□ -0.29
USE1-204ENST00000594399 OSBPL3Q9H4L5 887 aa13.25□□□□□ -0.29
USE1-204ENST00000594399 GNL3LQ9NVN8 582 aaKnown RBP13.25□□□□□ -0.29
USE1-204ENST00000594399 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 ATP5JP18859 108 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
USE1-204ENST00000594399 BCAMP50895 628 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 AOC3Q16853 763 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 FBXO33Q7Z6M2 555 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
USE1-204ENST00000594399 ZNF512BQ96KM6 892 aaPredicted RBP13.24□□□□□ -0.29
USE1-204ENST00000594399 VPS33BQ9H267 617 aa13.24□□□□□ -0.29
USE1-204ENST00000594399 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
USE1-204ENST00000594399 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
USE1-204ENST00000594399 G3V3G9 751 aa13.23□□□□□ -0.29
USE1-204ENST00000594399 SEMA3EO15041 775 aa13.23□□□□□ -0.29
USE1-204ENST00000594399 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
USE1-204ENST00000594399 RASSF7Q02833 373 aa13.23□□□□□ -0.29
USE1-204ENST00000594399 DCAF8Q5TAQ9 597 aa13.23□□□□□ -0.29
USE1-204ENST00000594399 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
USE1-204ENST00000594399 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
USE1-204ENST00000594399 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
USE1-204ENST00000594399 ZBTB22O15209 634 aa13.22□□□□□ -0.29
USE1-204ENST00000594399 FRAT2O75474 233 aaPredicted RBP13.22□□□□□ -0.29
USE1-204ENST00000594399 RASGRF1Q13972 1273 aa13.22□□□□□ -0.29
USE1-204ENST00000594399 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
USE1-204ENST00000594399 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
USE1-204ENST00000594399 COL4A5P29400 1685 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 ECE2O60344 883 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 IL1R1P14778 569 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 MCAMP43121 646 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 SCARF1Q14162 830 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 LARGE2Q8N3Y3 721 aa13.21□□□□□ -0.29
USE1-204ENST00000594399 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
USE1-204ENST00000594399 DNAJC2Q99543 621 aaKnown RBP13.21□□□□□ -0.29
USE1-204ENST00000594399 HAUS7Q99871 368 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms