RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ATG9AQ7Z3C6 839 aa24.33■■□□□ 1.49
LSM4-203ENST00000593829 NMRK2Q9NPI5 230 aa24.32■■□□□ 1.48
LSM4-203ENST00000593829 PDE8BO95263 885 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 KLRK1P26718 216 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 IL15P40933 162 aaPredicted RBP24.31■■□□□ 1.48
LSM4-203ENST00000593829 C15orf52Q6ZUT6 534 aaKnown RBP24.31■■□□□ 1.48
LSM4-203ENST00000593829 TXNRD3Q86VQ6 643 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 VGLL2Q8N8G2 317 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 GJA3Q9Y6H8 435 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 RAD17O75943 681 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 POLA2Q14181 598 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 CIAPIN1Q6FI81 312 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 SSH3Q8TE77 659 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 RRAGCQ9HB90 399 aa24.31■■□□□ 1.48
LSM4-203ENST00000593829 TNIP1Q15025 636 aa24.3■■□□□ 1.48
LSM4-203ENST00000593829 CEP85Q6P2H3 762 aa24.3■■□□□ 1.48
LSM4-203ENST00000593829 PODNQ7Z5L7 613 aa24.3■■□□□ 1.48
LSM4-203ENST00000593829 L3MBTL3Q96JM7 780 aaPredicted RBP24.3■■□□□ 1.48
LSM4-203ENST00000593829 COA1Q9GZY4 146 aa24.3■■□□□ 1.48
LSM4-203ENST00000593829 IRS2Q9Y4H2 1338 aa24.29■■□□□ 1.48
LSM4-203ENST00000593829 CCDC136Q96JN2 1154 aa24.29■■□□□ 1.48
LSM4-203ENST00000593829 CEP126Q9P2H0 1117 aa24.29■■□□□ 1.48
LSM4-203ENST00000593829 WDR90Q96KV7 1748 aa24.28■■□□□ 1.48
LSM4-203ENST00000593829 VEGFAP15692 232 aaPredicted RBP24.28■■□□□ 1.48
LSM4-203ENST00000593829 PUM3Q15397 648 aaKnown RBP24.27■■□□□ 1.48
LSM4-203ENST00000593829 KCNQ5Q9NR82 932 aa24.27■■□□□ 1.48
LSM4-203ENST00000593829 ZNF804AQ7Z570 1209 aa24.27■■□□□ 1.48
LSM4-203ENST00000593829 RPAP2Q8IXW5 612 aaPredicted RBP24.27■■□□□ 1.48
LSM4-203ENST00000593829 G3BP1Q13283 466 aaKnown RBP eCLIP24.26■■□□□ 1.47
LSM4-203ENST00000593829 IQCA1LA6NCM1 817 aa24.25■■□□□ 1.47
LSM4-203ENST00000593829 POTECB2RU33 542 aa24.25■■□□□ 1.47
LSM4-203ENST00000593829 PSMD14O00487 310 aa24.25■■□□□ 1.47
LSM4-203ENST00000593829 KIF3CO14782 793 aa24.25■■□□□ 1.47
LSM4-203ENST00000593829 CD209Q9NNX6 404 aa24.25■■□□□ 1.47
LSM4-203ENST00000593829 IFIT1P09914 478 aaKnown RBP24.24■■□□□ 1.47
LSM4-203ENST00000593829 FGFR2P21802 821 aa24.24■■□□□ 1.47
LSM4-203ENST00000593829 LPIN2Q92539 896 aa24.24■■□□□ 1.47
LSM4-203ENST00000593829 SURF6O75683 361 aaKnown RBP24.23■■□□□ 1.47
LSM4-203ENST00000593829 USP17L3A6NCW0 530 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 USP17L4A6NCW7 530 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 SLC5A1P13866 664 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 LMOD1P29536 600 aaPredicted RBP24.23■■□□□ 1.47
LSM4-203ENST00000593829 GYG1P46976 350 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 USP17L1Q7RTZ2 530 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 FAM84BQ96KN1 310 aaPredicted RBP24.23■■□□□ 1.47
LSM4-203ENST00000593829 HACL1Q9UJ83 578 aa24.23■■□□□ 1.47
LSM4-203ENST00000593829 HMMRO75330 724 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 VIL1P09327 827 aaKnown RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 HIBADHP31937 336 aaKnown RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 GMPSP49915 693 aaPredicted RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 SCNN1DP51172 638 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 ATP2B3Q16720 1220 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 CAVIN4Q5BKX8 364 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 SCN9AQ15858 1988 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 IL1R1P14778 569 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 ANP32AP39687 249 aaKnown RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 TFCP2Q12800 502 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 OS9Q13438 667 aaPredicted RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 VPS37DQ86XT2 251 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 C16orf71Q8IYS4 520 aaPredicted RBP24.22■■□□□ 1.47
LSM4-203ENST00000593829 CRBNQ96SW2 442 aa24.22■■□□□ 1.47
LSM4-203ENST00000593829 DEKP35659 375 aaKnown RBP24.21■■□□□ 1.47
LSM4-203ENST00000593829 AKAP2Q9Y2D5 859 aa24.21■■□□□ 1.47
LSM4-203ENST00000593829 SCN4AP35499 1836 aa24.21■■□□□ 1.47
LSM4-203ENST00000593829 RPS12P25398 132 aaKnown RBP24.2■■□□□ 1.46
LSM4-203ENST00000593829 FBXO33Q7Z6M2 555 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 SIRT2Q8IXJ6 389 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 ZBTB12Q9Y330 459 aaPredicted RBP24.2■■□□□ 1.46
LSM4-203ENST00000593829 STRIP1Q5VSL9 837 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 DPF2Q92785 391 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 FBXW7Q969H0 707 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 TAF1DQ9H5J8 278 aaPredicted RBP24.2■■□□□ 1.46
LSM4-203ENST00000593829 GPRC5DQ9NZD1 345 aa24.2■■□□□ 1.46
LSM4-203ENST00000593829 SASH1O94885 1247 aa24.19■■□□□ 1.46
LSM4-203ENST00000593829 TTLL5Q6EMB2 1281 aa24.19■■□□□ 1.46
LSM4-203ENST00000593829 RSBN1LQ6PCB5 846 aaPredicted RBP24.19■■□□□ 1.46
LSM4-203ENST00000593829 EPHX2P34913 555 aa24.18■■□□□ 1.46
LSM4-203ENST00000593829 EPS15P42566 896 aa24.18■■□□□ 1.46
LSM4-203ENST00000593829 GTF2IP78347 998 aa24.18■■□□□ 1.46
LSM4-203ENST00000593829 DACT2Q5SW24 774 aa24.18■■□□□ 1.46
LSM4-203ENST00000593829 AGBL3Q8NEM8 1001 aa24.18■■□□□ 1.46
LSM4-203ENST00000593829 TDRD7Q8NHU6 1098 aaKnown RBP24.18■■□□□ 1.46
LSM4-203ENST00000593829 PSME4Q14997 1843 aa24.17■■□□□ 1.46
LSM4-203ENST00000593829 TOMM70O94826 608 aa24.17■■□□□ 1.46
LSM4-203ENST00000593829 BCAMP50895 628 aa24.17■■□□□ 1.46
LSM4-203ENST00000593829 HSP90AB4PQ58FF6 505 aa24.16■■□□□ 1.46
LSM4-203ENST00000593829 CNOT7Q9UIV1 285 aaKnown RBP24.16■■□□□ 1.46
LSM4-203ENST00000593829 EXOC6BQ9Y2D4 811 aa24.16■■□□□ 1.46
LSM4-203ENST00000593829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.16■■□□□ 1.46
LSM4-203ENST00000593829 A0A1B0GUL7 405 aa24.16■■□□□ 1.46
LSM4-203ENST00000593829 TIMM10P62072 90 aa24.16■■□□□ 1.46
LSM4-203ENST00000593829 PNMA8AQ86V59 439 aaPredicted RBP24.16■■□□□ 1.46
LSM4-203ENST00000593829 ZNF609O15014 1411 aa24.16■■□□□ 1.46
LSM4-203ENST00000593829 MYO3BQ8WXR4 1341 aa24.15■■□□□ 1.46
LSM4-203ENST00000593829 MICALL2Q8IY33 904 aa24.15■■□□□ 1.46
LSM4-203ENST00000593829 ADARB2Q9NS39 739 aaKnown RBP24.15■■□□□ 1.46
LSM4-203ENST00000593829 H7C1D1 291 aa24.14■■□□□ 1.46
LSM4-203ENST00000593829 ERC1Q8IUD2 1116 aa24.14■■□□□ 1.46
LSM4-203ENST00000593829 GMLQ99445 158 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms