RNA–Protein interactions for RNA: ENST00000593549.5

SOX2-OT-220, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 756 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-220ENST00000593549 UBE4AQ14139 1066 aa16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 COA1Q9GZY4 146 aa16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 TAF1DQ9H5J8 278 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 HACL1Q9UJ83 578 aa16.92■□□□□ 0.3
SOX2-OT-220ENST00000593549 TOMM70O94826 608 aa16.91■□□□□ 0.3
SOX2-OT-220ENST00000593549 PDE8BO95263 885 aa16.91■□□□□ 0.3
SOX2-OT-220ENST00000593549 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
SOX2-OT-220ENST00000593549 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
SOX2-OT-220ENST00000593549 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 EPS15P42566 896 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 POLA2Q14181 598 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
SOX2-OT-220ENST00000593549 FGFR2P21802 821 aa16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 EPHX2P34913 555 aa16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 IL15P40933 162 aaPredicted RBP16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 SSH3Q8TE77 659 aa16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
SOX2-OT-220ENST00000593549 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 USP17L3A6NCW0 530 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 USP17L4A6NCW7 530 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 GYG1P46976 350 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 PUM3Q15397 648 aaKnown RBP16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 USP17L1Q7RTZ2 530 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 SCN9AQ15858 1988 aa16.88■□□□□ 0.29
SOX2-OT-220ENST00000593549 ZNF609O15014 1411 aa16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 IL1R1P14778 569 aa16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 DACT2Q5SW24 774 aa16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 FAM84BQ96KN1 310 aaPredicted RBP16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
SOX2-OT-220ENST00000593549 SCN4AP35499 1836 aa16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 EAPPQ56P03 285 aaPredicted RBP16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 DPF2Q92785 391 aa16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 GMLQ99445 158 aa16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
SOX2-OT-220ENST00000593549 HIBADHP31937 336 aaKnown RBP16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 GTF2IP78347 998 aa16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 STRIP1Q5VSL9 837 aa16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 FBXO33Q7Z6M2 555 aa16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 LPIN2Q92539 896 aa16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 FBXW7Q969H0 707 aa16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 ADARB2Q9NS39 739 aaKnown RBP16.85■□□□□ 0.29
SOX2-OT-220ENST00000593549 IFIT1P09914 478 aaKnown RBP16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 SLC5A1P13866 664 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 TFCP2Q12800 502 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 TTLL5Q6EMB2 1281 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 AGBL3Q8NEM8 1001 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
SOX2-OT-220ENST00000593549 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 EGFRP00533 1210 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 BCAMP50895 628 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 HIRAP54198 1017 aaPredicted RBP16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 FSTL1Q12841 308 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 SIRT2Q8IXJ6 389 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 JAG2Q9Y219 1238 aa16.83■□□□□ 0.28
SOX2-OT-220ENST00000593549 H7C1D1 291 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 SASH1O94885 1247 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
SOX2-OT-220ENST00000593549 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 ADORA1P30542 326 aa16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 PSME4Q14997 1843 aa16.81■□□□□ 0.28
SOX2-OT-220ENST00000593549 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
SOX2-OT-220ENST00000593549 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms