RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 RAD17O75943 681 aa23.24■■□□□ 1.31
TCF3-216ENST00000592395 PTPN12Q05209 780 aaKnown RBP23.24■■□□□ 1.31
TCF3-216ENST00000592395 MTX1Q13505 466 aa23.24■■□□□ 1.31
TCF3-216ENST00000592395 LRRC24Q50LG9 513 aa23.24■■□□□ 1.31
TCF3-216ENST00000592395 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
TCF3-216ENST00000592395 PLIN1O60240 522 aa23.23■■□□□ 1.31
TCF3-216ENST00000592395 TOMM70O94826 608 aa23.23■■□□□ 1.31
TCF3-216ENST00000592395 FBXO3Q9UK99 471 aa23.23■■□□□ 1.31
TCF3-216ENST00000592395 EYA2O00167 538 aa23.22■■□□□ 1.31
TCF3-216ENST00000592395 KLRK1P26718 216 aa23.22■■□□□ 1.31
TCF3-216ENST00000592395 C15orf52Q6ZUT6 534 aaKnown RBP23.22■■□□□ 1.31
TCF3-216ENST00000592395 PODNQ7Z5L7 613 aa23.22■■□□□ 1.31
TCF3-216ENST00000592395 TXNRD3Q86VQ6 643 aa23.22■■□□□ 1.31
TCF3-216ENST00000592395 HACL1Q9UJ83 578 aa23.22■■□□□ 1.31
TCF3-216ENST00000592395 SNAP23O00161 211 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 SRGAP3O43295 1099 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 LMOD1P29536 600 aaPredicted RBP23.21■■□□□ 1.31
TCF3-216ENST00000592395 SCNN1DP51172 638 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 UBE4AQ14139 1066 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 COA1Q9GZY4 146 aa23.21■■□□□ 1.31
TCF3-216ENST00000592395 IRS2Q9Y4H2 1338 aa23.2■■□□□ 1.3
TCF3-216ENST00000592395 PSMD14O00487 310 aa23.2■■□□□ 1.3
TCF3-216ENST00000592395 CIAO1O76071 339 aa23.2■■□□□ 1.3
TCF3-216ENST00000592395 C1QTNF8P60827 252 aa23.2■■□□□ 1.3
TCF3-216ENST00000592395 MVPQ14764 893 aaKnown RBP23.2■■□□□ 1.3
TCF3-216ENST00000592395 RBM46Q8TBY0 533 aaKnown RBP23.2■■□□□ 1.3
TCF3-216ENST00000592395 TAF1DQ9H5J8 278 aaPredicted RBP23.2■■□□□ 1.3
TCF3-216ENST00000592395 COPRSQ9NQ92 184 aa23.2■■□□□ 1.3
TCF3-216ENST00000592395 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
TCF3-216ENST00000592395 VGLL2Q8N8G2 317 aa23.19■■□□□ 1.3
TCF3-216ENST00000592395 KCNQ5Q9NR82 932 aa23.19■■□□□ 1.3
TCF3-216ENST00000592395 PDE8BO95263 885 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 EPHX2P34913 555 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 GMPSP49915 693 aaPredicted RBP23.18■■□□□ 1.3
TCF3-216ENST00000592395 ATG9AQ7Z3C6 839 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 SIL1Q9H173 461 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 GPRC5DQ9NZD1 345 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 DDX19BQ9UMR2 479 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 COG6Q9Y2V7 657 aa23.18■■□□□ 1.3
TCF3-216ENST00000592395 ZNF804AQ7Z570 1209 aa23.17■■□□□ 1.3
TCF3-216ENST00000592395 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
TCF3-216ENST00000592395 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
TCF3-216ENST00000592395 ZNF646O15015 1829 aaPredicted RBP23.17■■□□□ 1.3
TCF3-216ENST00000592395 VIL1P09327 827 aaKnown RBP23.16■■□□□ 1.3
TCF3-216ENST00000592395 RPS12P25398 132 aaKnown RBP23.16■■□□□ 1.3
TCF3-216ENST00000592395 PNMA8AQ86V59 439 aaPredicted RBP23.16■■□□□ 1.3
TCF3-216ENST00000592395 CD209Q9NNX6 404 aa23.16■■□□□ 1.3
TCF3-216ENST00000592395 ZNF609O15014 1411 aa23.16■■□□□ 1.3
TCF3-216ENST00000592395 ADAMTSL1Q8N6G6 1762 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 PNMA6EA0A0J9YXQ4 647 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 USP17L3A6NCW0 530 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 USP17L4A6NCW7 530 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 IL15P40933 162 aaPredicted RBP23.15■■□□□ 1.3
TCF3-216ENST00000592395 EPS15P42566 896 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 USP17L1Q7RTZ2 530 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 SMC1BQ8NDV3 1235 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 DPF2Q92785 391 aa23.15■■□□□ 1.3
TCF3-216ENST00000592395 CHMP4BQ9H444 224 aaKnown RBP23.15■■□□□ 1.3
TCF3-216ENST00000592395 ATP8B2P98198 1209 aa23.14■■□□□ 1.29
TCF3-216ENST00000592395 FSTL1Q12841 308 aa23.14■■□□□ 1.29
TCF3-216ENST00000592395 PUM3Q15397 648 aaKnown RBP23.14■■□□□ 1.29
TCF3-216ENST00000592395 C20orf194Q5TEA3 1177 aa23.14■■□□□ 1.29
TCF3-216ENST00000592395 RSBN1LQ6PCB5 846 aaPredicted RBP23.13■■□□□ 1.29
TCF3-216ENST00000592395 LDHDQ86WU2 507 aa23.13■■□□□ 1.29
TCF3-216ENST00000592395 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
TCF3-216ENST00000592395 CEP126Q9P2H0 1117 aa23.13■■□□□ 1.29
TCF3-216ENST00000592395 IL1R1P14778 569 aa23.12■■□□□ 1.29
TCF3-216ENST00000592395 FGFR2P21802 821 aa23.12■■□□□ 1.29
TCF3-216ENST00000592395 EAPPQ56P03 285 aaPredicted RBP23.12■■□□□ 1.29
TCF3-216ENST00000592395 STRIP1Q5VSL9 837 aa23.12■■□□□ 1.29
TCF3-216ENST00000592395 AGBL3Q8NEM8 1001 aa23.12■■□□□ 1.29
TCF3-216ENST00000592395 SSH3Q8TE77 659 aa23.12■■□□□ 1.29
TCF3-216ENST00000592395 CNOT7Q9UIV1 285 aaKnown RBP23.12■■□□□ 1.29
TCF3-216ENST00000592395 IFIT1P09914 478 aaKnown RBP23.11■■□□□ 1.29
TCF3-216ENST00000592395 POTEIP0CG38 1075 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 POTEJP0CG39 1038 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
TCF3-216ENST00000592395 GYG1P46976 350 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 DACT2Q5SW24 774 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 USP50Q70EL3 339 aaPredicted RBP23.11■■□□□ 1.29
TCF3-216ENST00000592395 MICALL2Q8IY33 904 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 FBXW7Q969H0 707 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 FAM84BQ96KN1 310 aaPredicted RBP23.11■■□□□ 1.29
TCF3-216ENST00000592395 ZBTB40Q9NUA8 1239 aa23.11■■□□□ 1.29
TCF3-216ENST00000592395 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 H7C1D1 291 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 SLC5A1P13866 664 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 RRP1P56182 461 aaKnown RBP23.1■■□□□ 1.29
TCF3-216ENST00000592395 CAVIN4Q5BKX8 364 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 TTLL5Q6EMB2 1281 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 CHADLQ6NUI6 762 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 LPIN2Q92539 896 aa23.1■■□□□ 1.29
TCF3-216ENST00000592395 ARAP2Q8WZ64 1704 aa23.09■■□□□ 1.29
TCF3-216ENST00000592395 GTF2IP78347 998 aa23.09■■□□□ 1.29
TCF3-216ENST00000592395 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
TCF3-216ENST00000592395 GMLQ99445 158 aa23.09■■□□□ 1.29
TCF3-216ENST00000592395 SHTN1A0MZ66 631 aa23.08■■□□□ 1.29
TCF3-216ENST00000592395 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms