RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 XDHP47989 1333 aa13.22□□□□□ -0.29
SDF2-209ENST00000591903 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
SDF2-209ENST00000591903 ZBTB48P10074 688 aaPredicted RBP13.22□□□□□ -0.29
SDF2-209ENST00000591903 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
SDF2-209ENST00000591903 LDLRAD1Q5T700 205 aa13.22□□□□□ -0.29
SDF2-209ENST00000591903 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
SDF2-209ENST00000591903 APOBEC3FQ8IUX4 373 aaKnown RBP13.22□□□□□ -0.29
SDF2-209ENST00000591903 WNT10BO00744 389 aa13.21□□□□□ -0.29
SDF2-209ENST00000591903 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
SDF2-209ENST00000591903 ATP2B4P23634 1241 aa13.21□□□□□ -0.29
SDF2-209ENST00000591903 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
SDF2-209ENST00000591903 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
SDF2-209ENST00000591903 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.29
SDF2-209ENST00000591903 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
SDF2-209ENST00000591903 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 UNCXA6NJT0 531 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
SDF2-209ENST00000591903 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 CEP290O15078 2479 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
SDF2-209ENST00000591903 MYH3P11055 1940 aa13.19□□□□□ -0.3
SDF2-209ENST00000591903 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
SDF2-209ENST00000591903 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
SDF2-209ENST00000591903 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
SDF2-209ENST00000591903 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
SDF2-209ENST00000591903 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
SDF2-209ENST00000591903 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
SDF2-209ENST00000591903 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 SZT2Q5T011 3432 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 HOXB7P09629 217 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 PRKG1Q13976 671 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
SDF2-209ENST00000591903 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 SEC31BQ9NQW1 1179 aa13.18□□□□□ -0.3
SDF2-209ENST00000591903 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
SDF2-209ENST00000591903 DLL1O00548 723 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
SDF2-209ENST00000591903 SP3Q02447 781 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 WNK4Q96J92 1243 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 ZNF333Q96JL9 665 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
SDF2-209ENST00000591903 PDE8AO60658 829 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 RIPK4P57078 832 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 CRHR2Q13324 411 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 SLC9C1Q4G0N8 1177 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 COA1Q9GZY4 146 aa13.16□□□□□ -0.3
SDF2-209ENST00000591903 SASH1O94885 1247 aa13.15□□□□□ -0.3
SDF2-209ENST00000591903 CCDC27Q2M243 656 aa13.15□□□□□ -0.3
SDF2-209ENST00000591903 SLC4A8Q2Y0W8 1093 aa13.15□□□□□ -0.3
SDF2-209ENST00000591903 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
SDF2-209ENST00000591903 H0YGN5 161 aa13.14□□□□□ -0.31
SDF2-209ENST00000591903 PCCAP05165 728 aaPredicted RBP13.14□□□□□ -0.31
SDF2-209ENST00000591903 CCDC191Q8NCU4 936 aa13.14□□□□□ -0.31
SDF2-209ENST00000591903 SLC17A8Q8NDX2 589 aa13.14□□□□□ -0.31
SDF2-209ENST00000591903 FBXW7Q969H0 707 aa13.14□□□□□ -0.31
SDF2-209ENST00000591903 DEFB129Q9H1M3 183 aa13.14□□□□□ -0.31
SDF2-209ENST00000591903 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
SDF2-209ENST00000591903 CHL1O00533 1208 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
SDF2-209ENST00000591903 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 SUPT20HL1Q3ZLR7 823 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
SDF2-209ENST00000591903 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
SDF2-209ENST00000591903 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
SDF2-209ENST00000591903 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
SDF2-209ENST00000591903 KRT24Q2M2I5 525 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
SDF2-209ENST00000591903 BSDC1Q9NW68 430 aaPredicted RBP13.12□□□□□ -0.31
SDF2-209ENST00000591903 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 MYO1BO43795 1136 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
SDF2-209ENST00000591903 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 LEMD3Q9Y2U8 911 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
SDF2-209ENST00000591903 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
SDF2-209ENST00000591903 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
SDF2-209ENST00000591903 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms