RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ECE1P42892 770 aa13.41□□□□□ -0.26
VPS4B-207ENST00000591519 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
VPS4B-207ENST00000591519 TSPYL6Q8N831 410 aa13.41□□□□□ -0.26
VPS4B-207ENST00000591519 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
VPS4B-207ENST00000591519 MYD88Q99836 296 aa13.41□□□□□ -0.26
VPS4B-207ENST00000591519 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
VPS4B-207ENST00000591519 PSMD14O00487 310 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
VPS4B-207ENST00000591519 CCDC184Q52MB2 194 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 KSR2Q6VAB6 950 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 SAPCD2Q86UD0 394 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 CAPNS2Q96L46 248 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 ZC3H12CQ9C0D7 883 aaKnown RBP13.4□□□□□ -0.26
VPS4B-207ENST00000591519 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 COL4A1P02462 1669 aa13.4□□□□□ -0.26
VPS4B-207ENST00000591519 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 MAP2K2P36507 400 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 WWC1Q8IX03 1113 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 MICALL2Q8IY33 904 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 GPR101Q96P66 508 aaPredicted RBP13.39□□□□□ -0.27
VPS4B-207ENST00000591519 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
VPS4B-207ENST00000591519 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
VPS4B-207ENST00000591519 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 RIOK3O14730 519 aaKnown RBP13.38□□□□□ -0.27
VPS4B-207ENST00000591519 ECE2O60344 883 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
VPS4B-207ENST00000591519 LBX1P52954 281 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 MAP3K2Q9Y2U5 619 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 IL16Q14005 1332 aa13.38□□□□□ -0.27
VPS4B-207ENST00000591519 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 POTEB3A0JP26 581 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
VPS4B-207ENST00000591519 HSPA8P11142 646 aaKnown RBP13.37□□□□□ -0.27
VPS4B-207ENST00000591519 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 POTEBQ6S5H4 581 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
VPS4B-207ENST00000591519 GGA1Q9UJY5 639 aa13.37□□□□□ -0.27
VPS4B-207ENST00000591519 THSD7BQ9C0I4 1608 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
VPS4B-207ENST00000591519 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 H7C1W4 665 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 ANP32CO43423 234 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 TWISTNBQ3B726 338 aaPredicted RBP13.36□□□□□ -0.27
VPS4B-207ENST00000591519 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
VPS4B-207ENST00000591519 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
VPS4B-207ENST00000591519 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
VPS4B-207ENST00000591519 UFL1O94874 794 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 EGFRP00533 1210 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
VPS4B-207ENST00000591519 ATP2B4P23634 1241 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 NEXNQ0ZGT2 675 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 USP48Q86UV5 1035 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 SPNS2Q8IVW8 549 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 HS3ST6Q96QI5 342 aa13.35□□□□□ -0.27
VPS4B-207ENST00000591519 BSDC1Q9NW68 430 aaPredicted RBP13.35□□□□□ -0.27
VPS4B-207ENST00000591519 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
VPS4B-207ENST00000591519 ZNF609O15014 1411 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 NEURL1BA8MQ27 555 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 CTSWP56202 376 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
VPS4B-207ENST00000591519 G2E3Q7L622 706 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
VPS4B-207ENST00000591519 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 XDHP47989 1333 aa13.34□□□□□ -0.27
VPS4B-207ENST00000591519 ZNF280AP59817 542 aaPredicted RBP13.33□□□□□ -0.28
VPS4B-207ENST00000591519 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
VPS4B-207ENST00000591519 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
VPS4B-207ENST00000591519 KRT26Q7Z3Y9 468 aa13.33□□□□□ -0.28
VPS4B-207ENST00000591519 WDR63Q8IWG1 891 aa13.33□□□□□ -0.28
VPS4B-207ENST00000591519 DCPSQ96C86 337 aaKnown RBP13.33□□□□□ -0.28
VPS4B-207ENST00000591519 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
VPS4B-207ENST00000591519 GMLQ99445 158 aa13.33□□□□□ -0.28
VPS4B-207ENST00000591519 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
VPS4B-207ENST00000591519 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
VPS4B-207ENST00000591519 CA12O43570 354 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 AOC2O75106 756 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 VAMP4O75379 141 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
VPS4B-207ENST00000591519 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 GCKRQ14397 625 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 RBM26Q5T8P6 1007 aaKnown RBP13.32□□□□□ -0.28
VPS4B-207ENST00000591519 RSBN1LQ6PCB5 846 aaPredicted RBP13.32□□□□□ -0.28
VPS4B-207ENST00000591519 GREM2Q9H772 168 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
VPS4B-207ENST00000591519 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 CSF1RP07333 972 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms