RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 CTSWP56202 376 aa20.63■□□□□ 0.89
GCDH-213ENST00000590627 POLA2Q14181 598 aa20.63■□□□□ 0.89
GCDH-213ENST00000590627 SSH3Q8TE77 659 aa20.63■□□□□ 0.89
GCDH-213ENST00000590627 TLL2Q9Y6L7 1015 aa20.63■□□□□ 0.89
GCDH-213ENST00000590627 HMMRO75330 724 aa20.62■□□□□ 0.89
GCDH-213ENST00000590627 LBX1P52954 281 aa20.62■□□□□ 0.89
GCDH-213ENST00000590627 LMBR1LQ6UX01 489 aa20.62■□□□□ 0.89
GCDH-213ENST00000590627 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
GCDH-213ENST00000590627 CAPNS2Q96L46 248 aa20.62■□□□□ 0.89
GCDH-213ENST00000590627 RWDD1Q9H446 243 aaPredicted RBP20.62■□□□□ 0.89
GCDH-213ENST00000590627 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
GCDH-213ENST00000590627 YDJCA8MPS7 323 aa20.61■□□□□ 0.89
GCDH-213ENST00000590627 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
GCDH-213ENST00000590627 HSPA8P11142 646 aaKnown RBP20.61■□□□□ 0.89
GCDH-213ENST00000590627 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
GCDH-213ENST00000590627 CCDC136Q96JN2 1154 aa20.61■□□□□ 0.89
GCDH-213ENST00000590627 RTL9Q8NET4 1388 aa20.6■□□□□ 0.89
GCDH-213ENST00000590627 WASHC4Q2M389 1173 aa20.6■□□□□ 0.89
GCDH-213ENST00000590627 PAXIP1Q6ZW49 1069 aaPredicted RBP20.6■□□□□ 0.89
GCDH-213ENST00000590627 DPF2Q92785 391 aa20.6■□□□□ 0.89
GCDH-213ENST00000590627 GPR101Q96P66 508 aaPredicted RBP20.6■□□□□ 0.89
GCDH-213ENST00000590627 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
GCDH-213ENST00000590627 IGHDP01880 384 aa20.59■□□□□ 0.89
GCDH-213ENST00000590627 CYP4F22Q6NT55 531 aa20.59■□□□□ 0.89
GCDH-213ENST00000590627 HHIPL1Q96JK4 782 aa20.59■□□□□ 0.89
GCDH-213ENST00000590627 CNOT7Q9UIV1 285 aaKnown RBP20.59■□□□□ 0.89
GCDH-213ENST00000590627 H7C1D1 291 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 CELF2O95319 508 aaKnown RBP20.58■□□□□ 0.89
GCDH-213ENST00000590627 MAP2K2P36507 400 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
GCDH-213ENST00000590627 HIRAP54198 1017 aaPredicted RBP20.58■□□□□ 0.89
GCDH-213ENST00000590627 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 CDC37L1Q7L3B6 337 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 SAPCD2Q86UD0 394 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 BEGAINQ9BUH8 593 aa20.58■□□□□ 0.89
GCDH-213ENST00000590627 GLIS2Q9BZE0 524 aaPredicted RBP20.58■□□□□ 0.89
GCDH-213ENST00000590627 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
GCDH-213ENST00000590627 TRPM4Q8TD43 1214 aa20.57■□□□□ 0.88
GCDH-213ENST00000590627 EYA3Q99504 573 aa20.57■□□□□ 0.88
GCDH-213ENST00000590627 C6orf229H3BNL8 230 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
GCDH-213ENST00000590627 FAM161AQ3B820 660 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 MICALL2Q8IY33 904 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 GREM2Q9H772 168 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 DCTPP1Q9H773 170 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 POLLQ9UGP5 575 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 MYH3P11055 1940 aa20.56■□□□□ 0.88
GCDH-213ENST00000590627 COL4A1P02462 1669 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 PSMD14O00487 310 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
GCDH-213ENST00000590627 GPSM2P81274 684 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 GRM1Q13255 1194 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
GCDH-213ENST00000590627 CCDC57Q2TAC2 916 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 SMC5Q8IY18 1101 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 DBNDD1Q9H9R9 158 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 NOP58Q9Y2X3 529 aaKnown RBP20.55■□□□□ 0.88
GCDH-213ENST00000590627 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
GCDH-213ENST00000590627 CHMP3Q9Y3E7 222 aa20.55■□□□□ 0.88
GCDH-213ENST00000590627 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 RIMBP2O15034 1052 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 ITGA6P23229 1130 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
GCDH-213ENST00000590627 CENPQQ7L2Z9 268 aaPredicted RBP20.54■□□□□ 0.88
GCDH-213ENST00000590627 TBC1D16Q8TBP0 767 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 PODXL2Q9NZ53 605 aa20.54■□□□□ 0.88
GCDH-213ENST00000590627 SHTN1A0MZ66 631 aa20.53■□□□□ 0.88
GCDH-213ENST00000590627 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
GCDH-213ENST00000590627 ECE2O60344 883 aa20.52■□□□□ 0.88
GCDH-213ENST00000590627 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
GCDH-213ENST00000590627 ZC3H12CQ9C0D7 883 aaKnown RBP20.52■□□□□ 0.88
GCDH-213ENST00000590627 CA12O43570 354 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 AOC2O75106 756 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 SURF6O75683 361 aaKnown RBP20.51■□□□□ 0.87
GCDH-213ENST00000590627 HSP90AB4PQ58FF6 505 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 SAMD7Q7Z3H4 446 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 ZNF408Q9H9D4 720 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 SEC31BQ9NQW1 1179 aa20.51■□□□□ 0.87
GCDH-213ENST00000590627 CIAO1O76071 339 aa20.5■□□□□ 0.87
GCDH-213ENST00000590627 DOK7Q18PE1 504 aa20.5■□□□□ 0.87
GCDH-213ENST00000590627 USP48Q86UV5 1035 aa20.5■□□□□ 0.87
GCDH-213ENST00000590627 CDC5LQ99459 802 aaKnown RBP20.5■□□□□ 0.87
GCDH-213ENST00000590627 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
GCDH-213ENST00000590627 RAB11FIP3O75154 756 aa20.49■□□□□ 0.87
GCDH-213ENST00000590627 TBC1D10BQ4KMP7 808 aaPredicted RBP20.49■□□□□ 0.87
GCDH-213ENST00000590627 KLHDC4Q8TBB5 520 aa20.49■□□□□ 0.87
GCDH-213ENST00000590627 SCN9AQ15858 1988 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 ZNF609O15014 1411 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 EYA2O00167 538 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 UFL1O94874 794 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 VIL1P09327 827 aaKnown RBP20.48■□□□□ 0.87
GCDH-213ENST00000590627 TAF7LQ5H9L4 462 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 ABHD8Q96I13 439 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 ZNF594Q96JF6 807 aaPredicted RBP20.48■□□□□ 0.87
GCDH-213ENST00000590627 KCNQ5Q9NR82 932 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 ANKIB1Q9P2G1 1089 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 GGA1Q9UJY5 639 aa20.48■□□□□ 0.87
GCDH-213ENST00000590627 EXOC6BQ9Y2D4 811 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms