RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 WDR90Q96KV7 1748 aa23.29■■□□□ 1.32
MBD1-223ENST00000590215 POTECB2RU33 542 aa23.28■■□□□ 1.32
MBD1-223ENST00000590215 CIAPIN1Q6FI81 312 aa23.28■■□□□ 1.32
MBD1-223ENST00000590215 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
MBD1-223ENST00000590215 CEP126Q9P2H0 1117 aa23.28■■□□□ 1.32
MBD1-223ENST00000590215 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
MBD1-223ENST00000590215 TNIP1Q15025 636 aa23.27■■□□□ 1.32
MBD1-223ENST00000590215 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
MBD1-223ENST00000590215 G3V3G9 751 aa23.26■■□□□ 1.31
MBD1-223ENST00000590215 RAD17O75943 681 aa23.26■■□□□ 1.31
MBD1-223ENST00000590215 DCAF8Q5TAQ9 597 aa23.26■■□□□ 1.31
MBD1-223ENST00000590215 SIRT2Q8IXJ6 389 aa23.26■■□□□ 1.31
MBD1-223ENST00000590215 KCNQ5Q9NR82 932 aa23.26■■□□□ 1.31
MBD1-223ENST00000590215 SCN9AQ15858 1988 aa23.25■■□□□ 1.31
MBD1-223ENST00000590215 KIF3CO14782 793 aa23.25■■□□□ 1.31
MBD1-223ENST00000590215 LPIN2Q92539 896 aa23.25■■□□□ 1.31
MBD1-223ENST00000590215 FAM84BQ96KN1 310 aaPredicted RBP23.25■■□□□ 1.31
MBD1-223ENST00000590215 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
MBD1-223ENST00000590215 CD209Q9NNX6 404 aa23.25■■□□□ 1.31
MBD1-223ENST00000590215 SUPT16HQ9Y5B9 1047 aaKnown RBP23.25■■□□□ 1.31
MBD1-223ENST00000590215 PSMD14O00487 310 aa23.24■■□□□ 1.31
MBD1-223ENST00000590215 VIL1P09327 827 aaKnown RBP23.24■■□□□ 1.31
MBD1-223ENST00000590215 IL1R1P14778 569 aa23.24■■□□□ 1.31
MBD1-223ENST00000590215 VEGFAP15692 232 aaPredicted RBP23.24■■□□□ 1.31
MBD1-223ENST00000590215 G3BP1Q13283 466 aaKnown RBP eCLIP23.24■■□□□ 1.31
MBD1-223ENST00000590215 ZNF804AQ7Z570 1209 aa23.24■■□□□ 1.31
MBD1-223ENST00000590215 GJA3Q9Y6H8 435 aa23.24■■□□□ 1.31
MBD1-223ENST00000590215 FBXO33Q7Z6M2 555 aa23.23■■□□□ 1.31
MBD1-223ENST00000590215 ZNF609O15014 1411 aa23.23■■□□□ 1.31
MBD1-223ENST00000590215 IQCA1LA6NCM1 817 aa23.22■■□□□ 1.31
MBD1-223ENST00000590215 SURF6O75683 361 aaKnown RBP23.22■■□□□ 1.31
MBD1-223ENST00000590215 SCNN1DP51172 638 aa23.22■■□□□ 1.31
MBD1-223ENST00000590215 CRBNQ96SW2 442 aa23.22■■□□□ 1.31
MBD1-223ENST00000590215 USP17L3A6NCW0 530 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 USP17L4A6NCW7 530 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 HMMRO75330 724 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 SASH1O94885 1247 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
MBD1-223ENST00000590215 SLC5A1P13866 664 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 RPS12P25398 132 aaKnown RBP23.21■■□□□ 1.31
MBD1-223ENST00000590215 HIBADHP31937 336 aaKnown RBP23.21■■□□□ 1.31
MBD1-223ENST00000590215 GYG1P46976 350 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 TFCP2Q12800 502 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 ATP2B3Q16720 1220 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 USP17L1Q7RTZ2 530 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 DPF2Q92785 391 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 SCN4AP35499 1836 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 PSME4Q14997 1843 aa23.21■■□□□ 1.31
MBD1-223ENST00000590215 GMPSP49915 693 aaPredicted RBP23.2■■□□□ 1.3
MBD1-223ENST00000590215 STRIP1Q5VSL9 837 aa23.2■■□□□ 1.3
MBD1-223ENST00000590215 TDRD7Q8NHU6 1098 aaKnown RBP23.2■■□□□ 1.3
MBD1-223ENST00000590215 AKAP2Q9Y2D5 859 aa23.2■■□□□ 1.3
MBD1-223ENST00000590215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
MBD1-223ENST00000590215 ZBTB22O15209 634 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 CAVIN4Q5BKX8 364 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 DACT2Q5SW24 774 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 GMLQ99445 158 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 GPR108Q9NPR9 543 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 GPRC5DQ9NZD1 345 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 HACL1Q9UJ83 578 aa23.19■■□□□ 1.3
MBD1-223ENST00000590215 AAMPQ13685 434 aa23.18■■□□□ 1.3
MBD1-223ENST00000590215 TTLL5Q6EMB2 1281 aa23.18■■□□□ 1.3
MBD1-223ENST00000590215 RSBN1LQ6PCB5 846 aaPredicted RBP23.18■■□□□ 1.3
MBD1-223ENST00000590215 AGBL3Q8NEM8 1001 aa23.18■■□□□ 1.3
MBD1-223ENST00000590215 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
MBD1-223ENST00000590215 ZBTB12Q9Y330 459 aaPredicted RBP23.18■■□□□ 1.3
MBD1-223ENST00000590215 BCAMP50895 628 aa23.17■■□□□ 1.3
MBD1-223ENST00000590215 HSP90AB4PQ58FF6 505 aa23.17■■□□□ 1.3
MBD1-223ENST00000590215 FAM205AQ6ZU69 1335 aa23.16■■□□□ 1.3
MBD1-223ENST00000590215 A0A1B0GUL7 405 aa23.16■■□□□ 1.3
MBD1-223ENST00000590215 LMOD1P29536 600 aaPredicted RBP23.16■■□□□ 1.3
MBD1-223ENST00000590215 EPS15P42566 896 aa23.16■■□□□ 1.3
MBD1-223ENST00000590215 VPS37DQ86XT2 251 aa23.16■■□□□ 1.3
MBD1-223ENST00000590215 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
MBD1-223ENST00000590215 ZNF646O15015 1829 aaPredicted RBP23.16■■□□□ 1.3
MBD1-223ENST00000590215 EPHX2P34913 555 aa23.15■■□□□ 1.3
MBD1-223ENST00000590215 TIMM10P62072 90 aa23.15■■□□□ 1.3
MBD1-223ENST00000590215 FKBP1AP62942 108 aaKnown RBP23.15■■□□□ 1.3
MBD1-223ENST00000590215 GTF2IP78347 998 aa23.15■■□□□ 1.3
MBD1-223ENST00000590215 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
MBD1-223ENST00000590215 ERC1Q8IUD2 1116 aa23.15■■□□□ 1.3
MBD1-223ENST00000590215 EXOC6BQ9Y2D4 811 aa23.15■■□□□ 1.3
MBD1-223ENST00000590215 MYO3BQ8WXR4 1341 aa23.14■■□□□ 1.3
MBD1-223ENST00000590215 TOMM70O94826 608 aa23.14■■□□□ 1.29
MBD1-223ENST00000590215 CNOT7Q9UIV1 285 aaKnown RBP23.14■■□□□ 1.29
MBD1-223ENST00000590215 ADORA1P30542 326 aa23.13■■□□□ 1.29
MBD1-223ENST00000590215 XAGE2Q96GT9 111 aa23.13■■□□□ 1.29
MBD1-223ENST00000590215 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
MBD1-223ENST00000590215 ARAP2Q8WZ64 1704 aa23.13■■□□□ 1.29
MBD1-223ENST00000590215 RAB11FIP3O75154 756 aa23.12■■□□□ 1.29
MBD1-223ENST00000590215 MMP14P50281 582 aa23.12■■□□□ 1.29
MBD1-223ENST00000590215 ZNF280AP59817 542 aaPredicted RBP23.12■■□□□ 1.29
MBD1-223ENST00000590215 TNNI3KQ59H18 835 aa23.12■■□□□ 1.29
MBD1-223ENST00000590215 PNMA8AQ86V59 439 aaPredicted RBP23.12■■□□□ 1.29
MBD1-223ENST00000590215 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
MBD1-223ENST00000590215 C16orf71Q8IYS4 520 aaPredicted RBP23.12■■□□□ 1.29
MBD1-223ENST00000590215 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
MBD1-223ENST00000590215 FPGT-TNNI3KV9GXZ4 949 aa23.12■■□□□ 1.29
MBD1-223ENST00000590215 USP50Q70EL3 339 aaPredicted RBP23.11■■□□□ 1.29
MBD1-223ENST00000590215 CERS5Q8N5B7 392 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms