RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
ATG4D-211ENST00000589753 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATG4D-211ENST00000589753 GPR162Q16538 588 aa18.66■□□□□ 0.58
ATG4D-211ENST00000589753 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
ATG4D-211ENST00000589753 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-211ENST00000589753 FER1L6Q2WGJ9 1857 aa18.65■□□□□ 0.58
ATG4D-211ENST00000589753 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
ATG4D-211ENST00000589753 GPR101Q96P66 508 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-211ENST00000589753 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
ATG4D-211ENST00000589753 ARAP2Q8WZ64 1704 aa18.65■□□□□ 0.58
ATG4D-211ENST00000589753 MED23Q9ULK4 1368 aa18.65■□□□□ 0.58
ATG4D-211ENST00000589753 NFKBIEO00221 500 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 KLRK1P26718 216 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 ADORA1P30542 326 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 ARHGAP27Q6ZUM4 889 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 C15orf52Q6ZUT6 534 aaKnown RBP18.64■□□□□ 0.57
ATG4D-211ENST00000589753 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 IRS2Q9Y4H2 1338 aa18.64■□□□□ 0.57
ATG4D-211ENST00000589753 RIMBP2O15034 1052 aa18.63■□□□□ 0.57
ATG4D-211ENST00000589753 CAVIN4Q5BKX8 364 aa18.63■□□□□ 0.57
ATG4D-211ENST00000589753 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
ATG4D-211ENST00000589753 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
ATG4D-211ENST00000589753 DBNDD2Q9BQY9 259 aa18.63■□□□□ 0.57
ATG4D-211ENST00000589753 ZC3H12CQ9C0D7 883 aaKnown RBP18.63■□□□□ 0.57
ATG4D-211ENST00000589753 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
ATG4D-211ENST00000589753 DBNLQ9UJU6 430 aaKnown RBP18.63■□□□□ 0.57
ATG4D-211ENST00000589753 TXNRD3Q86VQ6 643 aa18.62■□□□□ 0.57
ATG4D-211ENST00000589753 VPS33BQ9H267 617 aa18.62■□□□□ 0.57
ATG4D-211ENST00000589753 ZNF277Q9NRM2 450 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-211ENST00000589753 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 HIBADHP31937 336 aaKnown RBP18.61■□□□□ 0.57
ATG4D-211ENST00000589753 GYG1P46976 350 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 RASSF7Q02833 373 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 KIAA2012Q0VF49 1180 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 AOC3Q16853 763 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 CCDC158Q5M9N0 1113 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 ZNF804AQ7Z570 1209 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 VPS37DQ86XT2 251 aa18.61■□□□□ 0.57
ATG4D-211ENST00000589753 OTUD7AQ8TE49 926 aaPredicted RBP18.61■□□□□ 0.57
ATG4D-211ENST00000589753 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
ATG4D-211ENST00000589753 IARSP41252 1262 aaKnown RBP18.6■□□□□ 0.57
ATG4D-211ENST00000589753 BCAMP50895 628 aa18.6■□□□□ 0.57
ATG4D-211ENST00000589753 CCDC102BQ68D86 513 aa18.6■□□□□ 0.57
ATG4D-211ENST00000589753 FBXO33Q7Z6M2 555 aa18.6■□□□□ 0.57
ATG4D-211ENST00000589753 SALL3Q9BXA9 1300 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 G3V3G9 751 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 MX1P20591 662 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 PDE4AP27815 886 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 PHKA1P46020 1223 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 TTC39AQ5SRH9 613 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 LARGE2Q8N3Y3 721 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 GPATCH3Q96I76 525 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 COA1Q9GZY4 146 aa18.59■□□□□ 0.57
ATG4D-211ENST00000589753 DOK7Q18PE1 504 aa18.58■□□□□ 0.56
ATG4D-211ENST00000589753 ECHDC1Q9NTX5 307 aa18.58■□□□□ 0.56
ATG4D-211ENST00000589753 GNL3LQ9NVN8 582 aaKnown RBP18.58■□□□□ 0.56
ATG4D-211ENST00000589753 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
ATG4D-211ENST00000589753 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
ATG4D-211ENST00000589753 CD209Q9NNX6 404 aa18.57■□□□□ 0.56
ATG4D-211ENST00000589753 ECE2O60344 883 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 IL1R1P14778 569 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 LMNB1P20700 586 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 ARID4AP29374 1257 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-211ENST00000589753 PRELPP51888 382 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 PDE1AP54750 535 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 PLEKHM2Q8IWE5 1019 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 NIM1KQ8IY84 436 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 ZNF512BQ96KM6 892 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-211ENST00000589753 DBNDD1Q9H9R9 158 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
ATG4D-211ENST00000589753 ERC2O15083 957 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-211ENST00000589753 ATP5JP18859 108 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 PODNQ7Z5L7 613 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 SKAP1Q86WV1 359 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 TDRD7Q8NHU6 1098 aaKnown RBP18.55■□□□□ 0.56
ATG4D-211ENST00000589753 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
ATG4D-211ENST00000589753 IQSEC3Q9UPP2 1182 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-211ENST00000589753 COL4A5P29400 1685 aa18.54■□□□□ 0.56
ATG4D-211ENST00000589753 SEMA3EO15041 775 aa18.54■□□□□ 0.56
ATG4D-211ENST00000589753 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATG4D-211ENST00000589753 OSBPL3Q9H4L5 887 aa18.54■□□□□ 0.56
ATG4D-211ENST00000589753 AOX1Q06278 1338 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 ZBTB22O15209 634 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 MCAMP43121 646 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 RGS3P49796 1198 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 DENND2AQ9ULE3 1009 aa18.53■□□□□ 0.56
ATG4D-211ENST00000589753 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.56
ATG4D-211ENST00000589753 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.56
ATG4D-211ENST00000589753 SCARF1Q14162 830 aa18.52■□□□□ 0.56
ATG4D-211ENST00000589753 SPATA5Q8NB90 893 aa18.52■□□□□ 0.56
ATG4D-211ENST00000589753 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
ATG4D-211ENST00000589753 HMG20BQ9P0W2 317 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms