RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 API5Q9BZZ5 524 aaKnown RBP24.6■■□□□ 1.53
TPM4-208ENST00000588410 BICC1Q9H694 974 aaKnown RBP24.6■■□□□ 1.53
TPM4-208ENST00000588410 PLIN1O60240 522 aa24.59■■□□□ 1.53
TPM4-208ENST00000588410 USP17L8P0C7I0 530 aa24.59■■□□□ 1.53
TPM4-208ENST00000588410 KLRK1P26718 216 aa24.59■■□□□ 1.53
TPM4-208ENST00000588410 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
TPM4-208ENST00000588410 DCPSQ96C86 337 aaKnown RBP24.59■■□□□ 1.53
TPM4-208ENST00000588410 MYH3P11055 1940 aa24.59■■□□□ 1.53
TPM4-208ENST00000588410 RARSP54136 660 aaKnown RBP24.58■■□□□ 1.53
TPM4-208ENST00000588410 DEFB115Q30KQ5 88 aa24.58■■□□□ 1.53
TPM4-208ENST00000588410 STRIP1Q5VSL9 837 aa24.58■■□□□ 1.53
TPM4-208ENST00000588410 USP44Q9H0E7 712 aa24.58■■□□□ 1.53
TPM4-208ENST00000588410 EGFRP00533 1210 aa24.57■■□□□ 1.52
TPM4-208ENST00000588410 BRPF1P55201 1214 aaPredicted RBP24.57■■□□□ 1.52
TPM4-208ENST00000588410 ZNF280AP59817 542 aaPredicted RBP24.57■■□□□ 1.52
TPM4-208ENST00000588410 RABL6Q3YEC7 729 aaPredicted RBP24.57■■□□□ 1.52
TPM4-208ENST00000588410 IFFO2Q5TF58 517 aa24.57■■□□□ 1.52
TPM4-208ENST00000588410 USP48Q86UV5 1035 aa24.57■■□□□ 1.52
TPM4-208ENST00000588410 ZNF609O15014 1411 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 RASSF10A6NK89 507 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 SNAP23O00161 211 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 CELF2O95319 508 aaKnown RBP24.56■■□□□ 1.52
TPM4-208ENST00000588410 DACT2Q5SW24 774 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 ZNF804AQ7Z570 1209 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 GMLQ99445 158 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 ZNF408Q9H9D4 720 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 MYO3BQ8WXR4 1341 aa24.56■■□□□ 1.52
TPM4-208ENST00000588410 VEGFBP49765 207 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 CST9Q5W186 159 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 TTLL5Q6EMB2 1281 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 C15orf52Q6ZUT6 534 aaKnown RBP24.55■■□□□ 1.52
TPM4-208ENST00000588410 PAXIP1Q6ZW49 1069 aaPredicted RBP24.55■■□□□ 1.52
TPM4-208ENST00000588410 KRT26Q7Z3Y9 468 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 OGFOD1Q8N543 542 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 ANKRD44Q8N8A2 993 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 CD209Q9NNX6 404 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 KIF16BQ96L93 1317 aa24.55■■□□□ 1.52
TPM4-208ENST00000588410 MXD3Q9BW11 206 aa24.54■■□□□ 1.52
TPM4-208ENST00000588410 MYOZ2Q9NPC6 264 aa24.54■■□□□ 1.52
TPM4-208ENST00000588410 GTF2IP78347 998 aa24.53■■□□□ 1.52
TPM4-208ENST00000588410 SCARF1Q14162 830 aa24.53■■□□□ 1.52
TPM4-208ENST00000588410 PUS3Q9BZE2 481 aaKnown RBP24.53■■□□□ 1.52
TPM4-208ENST00000588410 GGA3Q9NZ52 723 aa24.53■■□□□ 1.52
TPM4-208ENST00000588410 MROH5Q6ZUA9 1318 aa24.53■■□□□ 1.52
TPM4-208ENST00000588410 UBTFL1P0CB47 393 aaPredicted RBP24.52■■□□□ 1.52
TPM4-208ENST00000588410 HSPA1AP0DMV8 641 aaKnown RBP24.52■■□□□ 1.52
TPM4-208ENST00000588410 HSPA1BP0DMV9 641 aaKnown RBP24.52■■□□□ 1.52
TPM4-208ENST00000588410 SULF1Q8IWU6 871 aa24.52■■□□□ 1.52
TPM4-208ENST00000588410 HDAC5Q9UQL6 1122 aa24.52■■□□□ 1.52
TPM4-208ENST00000588410 SPEF2Q9C093 1822 aa24.51■■□□□ 1.51
TPM4-208ENST00000588410 UBE4AQ14139 1066 aa24.51■■□□□ 1.51
TPM4-208ENST00000588410 ARHGAP45Q92619 1136 aa24.51■■□□□ 1.51
TPM4-208ENST00000588410 TLL2Q9Y6L7 1015 aa24.51■■□□□ 1.51
TPM4-208ENST00000588410 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
TPM4-208ENST00000588410 MMP14P50281 582 aa24.5■■□□□ 1.51
TPM4-208ENST00000588410 METTL24Q5JXM2 366 aa24.5■■□□□ 1.51
TPM4-208ENST00000588410 HDAC9Q9UKV0 1011 aa24.5■■□□□ 1.51
TPM4-208ENST00000588410 RIPOR2Q9Y4F9 1068 aa24.5■■□□□ 1.51
TPM4-208ENST00000588410 IRS2Q9Y4H2 1338 aa24.5■■□□□ 1.51
TPM4-208ENST00000588410 ADM5C9JUS6 153 aa24.49■■□□□ 1.51
TPM4-208ENST00000588410 ECE1P42892 770 aa24.49■■□□□ 1.51
TPM4-208ENST00000588410 GRM1Q13255 1194 aa24.49■■□□□ 1.51
TPM4-208ENST00000588410 ANGEL2Q5VTE6 544 aaKnown RBP24.49■■□□□ 1.51
TPM4-208ENST00000588410 WDR33Q9C0J8 1336 aaKnown RBP24.49■■□□□ 1.51
TPM4-208ENST00000588410 ASTN2O75129 1339 aaPredicted RBP24.48■■□□□ 1.51
TPM4-208ENST00000588410 IL1R1P14778 569 aa24.48■■□□□ 1.51
TPM4-208ENST00000588410 SCN9AQ15858 1988 aa24.48■■□□□ 1.51
TPM4-208ENST00000588410 LRRC24Q50LG9 513 aa24.48■■□□□ 1.51
TPM4-208ENST00000588410 KIAA0825Q8IV33 1275 aa24.48■■□□□ 1.51
TPM4-208ENST00000588410 DLK2Q6UY11 383 aa24.47■■□□□ 1.51
TPM4-208ENST00000588410 SAPCD2Q86UD0 394 aa24.47■■□□□ 1.51
TPM4-208ENST00000588410 KLHDC4Q8TBB5 520 aa24.47■■□□□ 1.51
TPM4-208ENST00000588410 FRAT1Q92837 279 aaPredicted RBP24.47■■□□□ 1.51
TPM4-208ENST00000588410 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
TPM4-208ENST00000588410 HIBADHP31937 336 aaKnown RBP24.46■■□□□ 1.51
TPM4-208ENST00000588410 AIDAQ96BJ3 306 aa24.46■■□□□ 1.51
TPM4-208ENST00000588410 BCAR3O75815 825 aa24.45■■□□□ 1.5
TPM4-208ENST00000588410 CYP4F22Q6NT55 531 aa24.45■■□□□ 1.5
TPM4-208ENST00000588410 VPS37DQ86XT2 251 aa24.45■■□□□ 1.5
TPM4-208ENST00000588410 PITPNM2Q9BZ72 1349 aa24.44■■□□□ 1.5
TPM4-208ENST00000588410 GYG1P46976 350 aa24.44■■□□□ 1.5
TPM4-208ENST00000588410 NBPF9Q3BBW0 867 aa24.44■■□□□ 1.5
TPM4-208ENST00000588410 INTS3Q68E01 1043 aaKnown RBP24.44■■□□□ 1.5
TPM4-208ENST00000588410 C2orf69Q8N8R5 385 aa24.44■■□□□ 1.5
TPM4-208ENST00000588410 SASH1O94885 1247 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 PDE8BO95263 885 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 CAVIN4Q5BKX8 364 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 ATF7IPQ6VMQ6 1270 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 CDCA5Q96FF9 252 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 HHIPL1Q96JK4 782 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 GBA2Q9HCG7 927 aaPredicted RBP24.43■■□□□ 1.5
TPM4-208ENST00000588410 JAG2Q9Y219 1238 aa24.43■■□□□ 1.5
TPM4-208ENST00000588410 LRRFIP2Q9Y608 721 aaKnown RBP24.43■■□□□ 1.5
TPM4-208ENST00000588410 EYA2O00167 538 aa24.42■■□□□ 1.5
TPM4-208ENST00000588410 WNT10BO00744 389 aa24.42■■□□□ 1.5
TPM4-208ENST00000588410 GNAI3P08754 354 aa24.42■■□□□ 1.5
TPM4-208ENST00000588410 RFX5P48382 616 aaPredicted RBP24.42■■□□□ 1.5
TPM4-208ENST00000588410 HUNKP57058 714 aa24.42■■□□□ 1.5
TPM4-208ENST00000588410 FKBP1AP62942 108 aaKnown RBP24.42■■□□□ 1.5
TPM4-208ENST00000588410 MAP2K1Q02750 393 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms