RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 FOXO4P98177 505 aa18.25■□□□□ 0.51
VMP1-206ENST00000587945 SCARF1Q14162 830 aa18.25■□□□□ 0.51
VMP1-206ENST00000587945 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
VMP1-206ENST00000587945 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
VMP1-206ENST00000587945 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
VMP1-206ENST00000587945 ZNF804BA4D1E1 1349 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 SCN9AQ15858 1988 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 SNAP23O00161 211 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 MAP2K2P36507 400 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
VMP1-206ENST00000587945 SULF1Q8IWU6 871 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 ANKRD2Q9GZV1 360 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 GBA2Q9HCG7 927 aaPredicted RBP18.24■□□□□ 0.51
VMP1-206ENST00000587945 MYOZ2Q9NPC6 264 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 CHMP3Q9Y3E7 222 aa18.24■□□□□ 0.51
VMP1-206ENST00000587945 CHRNDQ07001 517 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 SCAF8Q9UPN6 1271 aaKnown RBP18.23■□□□□ 0.51
VMP1-206ENST00000587945 ZNF609O15014 1411 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
VMP1-206ENST00000587945 KCNJ4P48050 445 aa18.22■□□□□ 0.51
VMP1-206ENST00000587945 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
VMP1-206ENST00000587945 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
VMP1-206ENST00000587945 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
VMP1-206ENST00000587945 HELBQ8NG08 1087 aaPredicted RBP18.22■□□□□ 0.51
VMP1-206ENST00000587945 TRPM7Q96QT4 1865 aa18.21■□□□□ 0.51
VMP1-206ENST00000587945 GRM8O00222 908 aa18.21■□□□□ 0.51
VMP1-206ENST00000587945 TAF5LO75529 589 aa18.21■□□□□ 0.51
VMP1-206ENST00000587945 LMBR1LQ6UX01 489 aa18.21■□□□□ 0.51
VMP1-206ENST00000587945 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
VMP1-206ENST00000587945 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
VMP1-206ENST00000587945 STRIP1Q5VSL9 837 aa18.2■□□□□ 0.5
VMP1-206ENST00000587945 ZNF594Q96JF6 807 aaPredicted RBP18.2■□□□□ 0.5
VMP1-206ENST00000587945 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
VMP1-206ENST00000587945 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
VMP1-206ENST00000587945 RGMBQ6NW40 437 aa18.19■□□□□ 0.5
VMP1-206ENST00000587945 THSD7BQ9C0I4 1608 aa18.19■□□□□ 0.5
VMP1-206ENST00000587945 FAM155AB1AL88 458 aaPredicted RBP18.18■□□□□ 0.5
VMP1-206ENST00000587945 BRPF1P55201 1214 aaPredicted RBP18.18■□□□□ 0.5
VMP1-206ENST00000587945 GTF2IP78347 998 aa18.18■□□□□ 0.5
VMP1-206ENST00000587945 NOGQ13253 232 aa18.18■□□□□ 0.5
VMP1-206ENST00000587945 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
VMP1-206ENST00000587945 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
VMP1-206ENST00000587945 PLIN1O60240 522 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 ZNF157P51786 506 aaPredicted RBP18.17■□□□□ 0.5
VMP1-206ENST00000587945 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 TAF7LQ5H9L4 462 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 IRS2Q9Y4H2 1338 aa18.17■□□□□ 0.5
VMP1-206ENST00000587945 WNT10BO00744 389 aa18.16■□□□□ 0.5
VMP1-206ENST00000587945 SASH1O94885 1247 aa18.16■□□□□ 0.5
VMP1-206ENST00000587945 MRPL50Q8N5N7 158 aaKnown RBP18.16■□□□□ 0.5
VMP1-206ENST00000587945 MYO3BQ8WXR4 1341 aa18.16■□□□□ 0.5
VMP1-206ENST00000587945 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
VMP1-206ENST00000587945 KIF23Q02241 960 aaPredicted RBP18.15■□□□□ 0.5
VMP1-206ENST00000587945 LDHAL6AQ6ZMR3 332 aa18.15■□□□□ 0.5
VMP1-206ENST00000587945 MOB2Q70IA6 237 aa18.15■□□□□ 0.5
VMP1-206ENST00000587945 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
VMP1-206ENST00000587945 CNNM1Q9NRU3 951 aa18.15■□□□□ 0.5
VMP1-206ENST00000587945 SPEF2Q9C093 1822 aa18.14■□□□□ 0.5
VMP1-206ENST00000587945 MYH3P11055 1940 aa18.14■□□□□ 0.49
VMP1-206ENST00000587945 E9PSI1 815 aa18.14■□□□□ 0.49
VMP1-206ENST00000587945 CA12O43570 354 aa18.14■□□□□ 0.49
VMP1-206ENST00000587945 NBPF7P0C2Y1 421 aaPredicted RBP18.14■□□□□ 0.49
VMP1-206ENST00000587945 C15orf52Q6ZUT6 534 aaKnown RBP18.14■□□□□ 0.49
VMP1-206ENST00000587945 CCDC102AQ96A19 550 aa18.14■□□□□ 0.49
VMP1-206ENST00000587945 JAG2Q9Y219 1238 aa18.14■□□□□ 0.49
VMP1-206ENST00000587945 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
VMP1-206ENST00000587945 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
VMP1-206ENST00000587945 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
VMP1-206ENST00000587945 HDAC9Q9UKV0 1011 aa18.13■□□□□ 0.49
VMP1-206ENST00000587945 UBE2Q2LH0YL09 131 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 SLC10A3P09131 477 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 ZNF804AQ7Z570 1209 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 CDCA7LQ96GN5 454 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 ABHD8Q96I13 439 aa18.12■□□□□ 0.49
VMP1-206ENST00000587945 F8W031 263 aaPredicted RBP18.11■□□□□ 0.49
VMP1-206ENST00000587945 IL1R1P14778 569 aa18.11■□□□□ 0.49
VMP1-206ENST00000587945 RASAL3Q86YV0 1011 aa18.11■□□□□ 0.49
VMP1-206ENST00000587945 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
VMP1-206ENST00000587945 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
VMP1-206ENST00000587945 PCDHAC2Q9Y5I4 1007 aa18.11■□□□□ 0.49
VMP1-206ENST00000587945 POLR2AP24928 1970 aaKnown RBP18.1■□□□□ 0.49
VMP1-206ENST00000587945 UTYO14607 1347 aa18.1■□□□□ 0.49
VMP1-206ENST00000587945 FKBP1BP68106 108 aa18.1■□□□□ 0.49
VMP1-206ENST00000587945 TTLL12Q14166 644 aaPredicted RBP18.1■□□□□ 0.49
VMP1-206ENST00000587945 CSRNP1Q96S65 589 aa18.1■□□□□ 0.49
VMP1-206ENST00000587945 MMP14P50281 582 aa18.09■□□□□ 0.49
VMP1-206ENST00000587945 PSME4Q14997 1843 aa18.09■□□□□ 0.49
VMP1-206ENST00000587945 PTPRCP08575 1304 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms