RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 PASKQ96RG2 1323 aa30.87■■■□□ 2.53
CAPNS1-204ENST00000587718 SURF6O75683 361 aaKnown RBP30.87■■■□□ 2.53
CAPNS1-204ENST00000587718 ITGBL1O95965 494 aaPredicted RBP30.87■■■□□ 2.53
CAPNS1-204ENST00000587718 DPP8Q6V1X1 898 aaPredicted RBP30.87■■■□□ 2.53
CAPNS1-204ENST00000587718 NIM1KQ8IY84 436 aa30.87■■■□□ 2.53
CAPNS1-204ENST00000587718 ADAMTSL1Q8N6G6 1762 aa30.86■■■□□ 2.53
CAPNS1-204ENST00000587718 EAPPQ56P03 285 aaPredicted RBP30.86■■■□□ 2.53
CAPNS1-204ENST00000587718 TMC4Q7Z404 712 aa30.86■■■□□ 2.53
CAPNS1-204ENST00000587718 PNMA8AQ86V59 439 aaPredicted RBP30.86■■■□□ 2.53
CAPNS1-204ENST00000587718 GJA3Q9Y6H8 435 aa30.86■■■□□ 2.53
CAPNS1-204ENST00000587718 IRS4O14654 1257 aaPredicted RBP30.85■■■□□ 2.53
CAPNS1-204ENST00000587718 PTMSP20962 102 aa30.85■■■□□ 2.53
CAPNS1-204ENST00000587718 SCNN1DP51172 638 aa30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 ANAPC15P60006 121 aa30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 ZBTB38Q8NAP3 1195 aaPredicted RBP30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 CELF1Q92879 486 aaKnown RBP30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 C9orf78Q9NZ63 289 aaPredicted RBP30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 TTC41PQ6P2S7 1318 aa30.84■■■□□ 2.53
CAPNS1-204ENST00000587718 MCM4P33991 863 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 MYD88Q99836 296 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 ESYT1Q9BSJ8 1104 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 CREBZFQ9NS37 354 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 TAF1P21675 1872 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 KIAA2012Q0VF49 1180 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 CCDC191Q8NCU4 936 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 METTL22Q9BUU2 404 aaPredicted RBP30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 ZNRF3Q9ULT6 936 aa30.83■■■□□ 2.53
CAPNS1-204ENST00000587718 LTBP1Q14766 1721 aa30.82■■■□□ 2.52
CAPNS1-204ENST00000587718 ST18O60284 1047 aa30.82■■■□□ 2.52
CAPNS1-204ENST00000587718 MCCP23508 829 aa30.82■■■□□ 2.52
CAPNS1-204ENST00000587718 DDX11L8A8MPP1 907 aa30.81■■■□□ 2.52
CAPNS1-204ENST00000587718 GRM8O00222 908 aa30.81■■■□□ 2.52
CAPNS1-204ENST00000587718 CXCL9Q07325 125 aa30.81■■■□□ 2.52
CAPNS1-204ENST00000587718 COL4A1P02462 1669 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 CHMLP26374 656 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 EPS15P42566 896 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 CLEC11AQ9Y240 323 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 DUOX1Q9NRD9 1551 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 LRRC37AA6NMS7 1700 aa30.8■■■□□ 2.52
CAPNS1-204ENST00000587718 PCCAP05165 728 aaPredicted RBP30.79■■■□□ 2.52
CAPNS1-204ENST00000587718 NEXNQ0ZGT2 675 aa30.79■■■□□ 2.52
CAPNS1-204ENST00000587718 MCM2P49736 904 aa30.79■■■□□ 2.52
CAPNS1-204ENST00000587718 RAB3GAP1Q15042 981 aa30.78■■■□□ 2.52
CAPNS1-204ENST00000587718 CWC25Q9NXE8 425 aaPredicted RBP30.78■■■□□ 2.52
CAPNS1-204ENST00000587718 LMOD1P29536 600 aaPredicted RBP30.77■■■□□ 2.52
CAPNS1-204ENST00000587718 MAP1SQ66K74 1059 aaPredicted RBP30.77■■■□□ 2.52
CAPNS1-204ENST00000587718 CNTROBQ8N137 903 aa30.77■■■□□ 2.52
CAPNS1-204ENST00000587718 RPS8P62241 208 aaKnown RBP30.76■■■□□ 2.52
CAPNS1-204ENST00000587718 IFFO2Q5TF58 517 aa30.76■■■□□ 2.52
CAPNS1-204ENST00000587718 HSP90AA1P07900 732 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 CLEC17AQ6ZS10 378 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 PI4K2BQ8TCG2 481 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 CWC22Q9HCG8 908 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 GLRX3O76003 335 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 IGKV5-2P06315 115 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 HSP90B1P14625 803 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 CLASRPQ8N2M8 674 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 JARID2Q92833 1246 aaPredicted RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 GPATCH3Q96I76 525 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 GBP4Q96PP9 640 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 SEC31BQ9NQW1 1179 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 GPRC5DQ9NZD1 345 aa30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 NSFL1CQ9UNZ2 370 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-204ENST00000587718 PCNTO95613 3336 aa30.74■■■□□ 2.51
CAPNS1-204ENST00000587718 YDJCA8MPS7 323 aa30.74■■■□□ 2.51
CAPNS1-204ENST00000587718 CD2BP2O95400 341 aaKnown RBP30.74■■■□□ 2.51
CAPNS1-204ENST00000587718 TRIM6-TRIM34B2RNG4 842 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 PDE8AO60658 829 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 GPSM2P81274 684 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 CIAPIN1Q6FI81 312 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 USP50Q70EL3 339 aaPredicted RBP30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 SPRYD3Q8NCJ5 442 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 POLLQ9UGP5 575 aa30.73■■■□□ 2.51
CAPNS1-204ENST00000587718 IL1RAPL2Q9NP60 686 aa30.72■■■□□ 2.51
CAPNS1-204ENST00000587718 TMEM88BA6NKF7 163 aa30.71■■■□□ 2.51
CAPNS1-204ENST00000587718 WASHC4Q2M389 1173 aa30.71■■■□□ 2.51
CAPNS1-204ENST00000587718 CDHR2Q9BYE9 1310 aa30.71■■■□□ 2.51
CAPNS1-204ENST00000587718 RILPL2Q969X0 211 aa30.71■■■□□ 2.51
CAPNS1-204ENST00000587718 MKRN1Q9UHC7 482 aaKnown RBP30.71■■■□□ 2.51
CAPNS1-204ENST00000587718 NEURL1BA8MQ27 555 aa30.7■■■□□ 2.5
CAPNS1-204ENST00000587718 RAD17O75943 681 aa30.7■■■□□ 2.5
CAPNS1-204ENST00000587718 GMPSP49915 693 aaPredicted RBP30.7■■■□□ 2.5
CAPNS1-204ENST00000587718 ADARB2Q9NS39 739 aaKnown RBP30.7■■■□□ 2.5
CAPNS1-204ENST00000587718 AK9Q5TCS8 1911 aa30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 NUCB2P80303 420 aa30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 OS9Q13438 667 aaPredicted RBP30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 CWF19L2Q2TBE0 894 aaKnown RBP30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 CCDC152Q4G0S7 254 aa30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 CNTNAP1P78357 1384 aa30.69■■■□□ 2.5
CAPNS1-204ENST00000587718 GCKRQ14397 625 aa30.68■■■□□ 2.5
CAPNS1-204ENST00000587718 TNIP1Q15025 636 aa30.68■■■□□ 2.5
CAPNS1-204ENST00000587718 PODXL2Q9NZ53 605 aa30.68■■■□□ 2.5
CAPNS1-204ENST00000587718 TBC1D16Q8TBP0 767 aa30.67■■■□□ 2.5
CAPNS1-204ENST00000587718 SUCLG2Q96I99 432 aa30.67■■■□□ 2.5
CAPNS1-204ENST00000587718 BCL11AQ9H165 835 aa30.67■■■□□ 2.5
CAPNS1-204ENST00000587718 C6orf229H3BNL8 230 aa30.66■■■□□ 2.5
CAPNS1-204ENST00000587718 ECHDC1Q9NTX5 307 aa30.66■■■□□ 2.5
CAPNS1-204ENST00000587718 KAZALD1Q96I82 304 aa30.66■■■□□ 2.5
CAPNS1-204ENST00000587718 RIMBP2O15034 1052 aa30.65■■■□□ 2.5
CAPNS1-204ENST00000587718 SKOR2Q2VWA4 1001 aaPredicted RBP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms