RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 DBNLQ9UJU6 430 aaKnown RBP19.16■□□□□ 0.66
RANBP3-209ENST00000587411 PCDHA7Q9UN72 937 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 FHOD1Q9Y613 1164 aa19.16■□□□□ 0.66
RANBP3-209ENST00000587411 PHLPP2Q6ZVD8 1323 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 SH3TC1Q8TE82 1336 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 A0A087WWV3 80 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 TNNI3KQ59H18 835 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 C1orf141Q5JVX7 400 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 LRRC2Q9BYS8 371 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 IFNKQ9P0W0 207 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 FPGT-TNNI3KV9GXZ4 949 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 CLCN6P51797 869 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 HAUS7Q99871 368 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 SRRTQ9BXP5 876 aaKnown RBP19.15■□□□□ 0.66
RANBP3-209ENST00000587411 TMEM51Q9NW97 253 aa19.15■□□□□ 0.66
RANBP3-209ENST00000587411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.14■□□□□ 0.65
RANBP3-209ENST00000587411 IGKV5-2P06315 115 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 CYP2C19P33261 490 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 FOSBP53539 338 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 TICAM2Q86XR7 235 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 ETF1P62495 437 aaKnown RBP19.14■□□□□ 0.65
RANBP3-209ENST00000587411 EXOSC10Q01780 885 aaKnown RBP19.14■□□□□ 0.65
RANBP3-209ENST00000587411 APOBRQ0VD83 1088 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.65
RANBP3-209ENST00000587411 KCNG4Q8TDN1 519 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 ZNF274Q96GC6 653 aaPredicted RBP19.14■□□□□ 0.65
RANBP3-209ENST00000587411 LTN1O94822 1766 aa19.14■□□□□ 0.65
RANBP3-209ENST00000587411 NPHP1O15259 732 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 PNMA6AP0CW24 399 aaPredicted RBP19.13■□□□□ 0.65
RANBP3-209ENST00000587411 DPCR1Q3MIW9 517 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 ARHGAP29Q52LW3 1261 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 RIC3Q7Z5B4 369 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 BBXQ8WY36 941 aaPredicted RBP19.13■□□□□ 0.65
RANBP3-209ENST00000587411 DSCC1Q9BVC3 393 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 ST7Q9NRC1 585 aa19.13■□□□□ 0.65
RANBP3-209ENST00000587411 NEURL1BA8MQ27 555 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 YEATS4O95619 227 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 TPM1P09493 284 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 NLRP12P59046 1061 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 SEC62Q99442 399 aaKnown RBP19.12■□□□□ 0.65
RANBP3-209ENST00000587411 NFAT5O94916 1531 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 CARMIL3Q8ND23 1372 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 NDUFA8P51970 172 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 GCKRQ14397 625 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 HOMER1Q86YM7 354 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 UBXN4Q92575 508 aa19.12■□□□□ 0.65
RANBP3-209ENST00000587411 DNAJC2Q99543 621 aaKnown RBP19.12■□□□□ 0.65
RANBP3-209ENST00000587411 ERICH4A6NGS2 130 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 ATP8B1O43520 1251 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 CCT2P78371 535 aaKnown RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 AIMP1Q12904 312 aaKnown RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 SF3A1Q15459 793 aaKnown RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 TMCO3Q6UWJ1 677 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 KBTBD3Q8NAB2 608 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 LINC00301Q8NCQ3 95 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 ERCC4Q92889 916 aaPredicted RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 HELLSQ9NRZ9 838 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 A0A1B0GVL5 298 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 IKBKBO14920 756 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 ZRANB2O95218 330 aaKnown RBP eCLIP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 SLC3A2P08195 630 aaKnown RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 GTF2E1P29083 439 aaPredicted RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 STK38Q15208 465 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
RANBP3-209ENST00000587411 ORC3Q9UBD5 711 aaPredicted RBP19.11■□□□□ 0.65
RANBP3-209ENST00000587411 PDIA3P30101 505 aaKnown RBP19.1■□□□□ 0.65
RANBP3-209ENST00000587411 TFCP2Q12800 502 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 TEX35Q5T0J7 233 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 POLR3EQ9NVU0 708 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 PALLDQ8WX93 1383 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 PDIA6Q15084 440 aa19.1■□□□□ 0.65
RANBP3-209ENST00000587411 PLA2G4AP47712 749 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
RANBP3-209ENST00000587411 IRX5P78411 483 aaPredicted RBP19.09■□□□□ 0.65
RANBP3-209ENST00000587411 EPHA10Q5JZY3 1008 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 LRRN4CLQ8ND94 238 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 GUCY1B3Q02153 619 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
RANBP3-209ENST00000587411 NCAPHQ15003 741 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 FCHSD1Q86WN1 690 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 FBXL16Q8N461 479 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 MNS1Q8NEH6 495 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 NCOA5Q9HCD5 579 aaKnown RBP19.09■□□□□ 0.65
RANBP3-209ENST00000587411 NEDD4P46934 1319 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 PXDNQ92626 1479 aa19.09■□□□□ 0.65
RANBP3-209ENST00000587411 CBFA2T2O43439 604 aa19.08■□□□□ 0.65
RANBP3-209ENST00000587411 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.65
RANBP3-209ENST00000587411 SLC20A2Q08357 652 aa19.08■□□□□ 0.65
RANBP3-209ENST00000587411 KCNH5Q8NCM2 988 aa19.08■□□□□ 0.65
RANBP3-209ENST00000587411 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.65
RANBP3-209ENST00000587411 DNAI1Q9UI46 699 aa19.08■□□□□ 0.65
RANBP3-209ENST00000587411 LMTK3Q96Q04 1460 aa19.08■□□□□ 0.64
RANBP3-209ENST00000587411 EFCAB8A8MWE9 144 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms