RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 C15orf52Q6ZUT6 534 aaKnown RBP18.08■□□□□ 0.48
SMARCA4-212ENST00000586985 GPRC5DQ9NZD1 345 aa18.08■□□□□ 0.48
SMARCA4-212ENST00000586985 ZBTB12Q9Y330 459 aaPredicted RBP18.08■□□□□ 0.48
SMARCA4-212ENST00000586985 USP17L3A6NCW0 530 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 USP17L4A6NCW7 530 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 PDE8BO95263 885 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 RPS12P25398 132 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 KLRK1P26718 216 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 USP17L1Q7RTZ2 530 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 ZNF804AQ7Z570 1209 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 DPF2Q92785 391 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 SIL1Q9H173 461 aa18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 CNOT7Q9UIV1 285 aaKnown RBP18.07■□□□□ 0.48
SMARCA4-212ENST00000586985 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 MTX1Q13505 466 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 USP50Q70EL3 339 aaPredicted RBP18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 FBXW7Q969H0 707 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 CD209Q9NNX6 404 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
SMARCA4-212ENST00000586985 CIAO1O76071 339 aa18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 IL15P40933 162 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 LDHDQ86WU2 507 aa18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 ADARB2Q9NS39 739 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-212ENST00000586985 HIBADHP31937 336 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 ATP8B2P98198 1209 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 STRIP1Q5VSL9 837 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 VPS37DQ86XT2 251 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 AGBL3Q8NEM8 1001 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 DDX19BQ9UMR2 479 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
SMARCA4-212ENST00000586985 LTBP1Q14766 1721 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 POTEIP0CG38 1075 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 POTEJP0CG39 1038 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 GTF2IP78347 998 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 ATG9AQ7Z3C6 839 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 MICALL2Q8IY33 904 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 C1orf115Q9H7X2 142 aa18.03■□□□□ 0.48
SMARCA4-212ENST00000586985 GYG1P46976 350 aa18.02■□□□□ 0.48
SMARCA4-212ENST00000586985 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.482e-9■■■□□ 18.1
SMARCA4-212ENST00000586985 PUM3Q15397 648 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-212ENST00000586985 VGLL2Q8N8G2 317 aa18.02■□□□□ 0.48
SMARCA4-212ENST00000586985 FAM84BQ96KN1 310 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-212ENST00000586985 IRS2Q9Y4H2 1338 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 SLC5A1P13866 664 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 IL1R1P14778 569 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 HSPA6P17066 643 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 RBM26Q5T8P6 1007 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 LPIN2Q92539 896 aa18.01■□□□□ 0.47
SMARCA4-212ENST00000586985 MYO3BQ8WXR4 1341 aa18■□□□□ 0.47
SMARCA4-212ENST00000586985 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SMARCA4-212ENST00000586985 SASH1O94885 1247 aa18■□□□□ 0.47
SMARCA4-212ENST00000586985 USP17L8P0C7I0 530 aa18■□□□□ 0.47
SMARCA4-212ENST00000586985 FBXO33Q7Z6M2 555 aa18■□□□□ 0.47
SMARCA4-212ENST00000586985 OGFOD1Q8N543 542 aa18■□□□□ 0.47
SMARCA4-212ENST00000586985 SHTN1A0MZ66 631 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 FGFR2P21802 821 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 SPEF2Q9C093 1822 aa17.99■□□□□ 0.47
SMARCA4-212ENST00000586985 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 POLA2Q14181 598 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 TBC1D10BQ4KMP7 808 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 C20orf194Q5TEA3 1177 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 MAP1SQ66K74 1059 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 SSH3Q8TE77 659 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 GMLQ99445 158 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 AKAP2Q9Y2D5 859 aa17.98■□□□□ 0.47
SMARCA4-212ENST00000586985 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 MMP14P50281 582 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 BCAMP50895 628 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 HIRAP54198 1017 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 ZNF280AP59817 542 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 TFCP2Q12800 502 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 SCN4AP35499 1836 aa17.97■□□□□ 0.47
SMARCA4-212ENST00000586985 APLP1P51693 650 aa17.96■□□□□ 0.47
SMARCA4-212ENST00000586985 CEP85Q6P2H3 762 aa17.96■□□□□ 0.47
SMARCA4-212ENST00000586985 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-212ENST00000586985 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
SMARCA4-212ENST00000586985 GNL3LQ9NVN8 582 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-212ENST00000586985 ITGBL1O95965 494 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-212ENST00000586985 TIMM10P62072 90 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms