RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 PSMD1Q99460 953 aa22.44■■□□□ 1.18
RETREG3-205ENST00000586870 ZNF277Q9NRM2 450 aaPredicted RBP22.44■■□□□ 1.18
RETREG3-205ENST00000586870 BSDC1Q9NW68 430 aaPredicted RBP22.44■■□□□ 1.18
RETREG3-205ENST00000586870 EPB41L2O43491 1005 aaKnown RBP22.43■■□□□ 1.18
RETREG3-205ENST00000586870 NFKBIBQ15653 356 aa22.43■■□□□ 1.18
RETREG3-205ENST00000586870 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
RETREG3-205ENST00000586870 ECHDC1Q9NTX5 307 aa22.43■■□□□ 1.18
RETREG3-205ENST00000586870 ARFGEF1Q9Y6D6 1849 aa22.43■■□□□ 1.18
RETREG3-205ENST00000586870 RFX5P48382 616 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-205ENST00000586870 SLC51AQ86UW1 340 aa22.42■■□□□ 1.18
RETREG3-205ENST00000586870 SLKQ9H2G2 1235 aaPredicted RBP22.42■■□□□ 1.18
RETREG3-205ENST00000586870 C6orf229H3BNL8 230 aa22.42■■□□□ 1.18
RETREG3-205ENST00000586870 LAMB2P55268 1798 aa22.41■■□□□ 1.18
RETREG3-205ENST00000586870 GPSM2P81274 684 aa22.41■■□□□ 1.18
RETREG3-205ENST00000586870 AACSQ86V21 672 aa22.41■■□□□ 1.18
RETREG3-205ENST00000586870 IARSP41252 1262 aaKnown RBP22.4■■□□□ 1.18
RETREG3-205ENST00000586870 LDHAL6AQ6ZMR3 332 aa22.4■■□□□ 1.18
RETREG3-205ENST00000586870 JDP2Q8WYK2 163 aa22.4■■□□□ 1.18
RETREG3-205ENST00000586870 CNNM1Q9NRU3 951 aa22.4■■□□□ 1.18
RETREG3-205ENST00000586870 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
RETREG3-205ENST00000586870 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.18
RETREG3-205ENST00000586870 LARGE2Q8N3Y3 721 aa22.39■■□□□ 1.18
RETREG3-205ENST00000586870 ZNF594Q96JF6 807 aaPredicted RBP22.39■■□□□ 1.18
RETREG3-205ENST00000586870 MINPP1Q9UNW1 487 aa22.39■■□□□ 1.18
RETREG3-205ENST00000586870 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
RETREG3-205ENST00000586870 MCCP23508 829 aa22.39■■□□□ 1.17
RETREG3-205ENST00000586870 GGA1Q9UJY5 639 aa22.39■■□□□ 1.17
RETREG3-205ENST00000586870 CACNA1SQ13698 1873 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 K7ELQ4 463 aaPredicted RBP22.38■■□□□ 1.17
RETREG3-205ENST00000586870 PRELPP51888 382 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 EAF2Q96CJ1 260 aaPredicted RBP22.38■■□□□ 1.17
RETREG3-205ENST00000586870 EYA3Q99504 573 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 ANKRD2Q9GZV1 360 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 SIL1Q9H173 461 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 CHMP5Q9NZZ3 219 aa22.38■■□□□ 1.17
RETREG3-205ENST00000586870 XDHP47989 1333 aa22.37■■□□□ 1.17
RETREG3-205ENST00000586870 WASHC4Q2M389 1173 aa22.37■■□□□ 1.17
RETREG3-205ENST00000586870 RTFDC1Q9BY42 306 aaPredicted RBP22.37■■□□□ 1.17
RETREG3-205ENST00000586870 VPS33BQ9H267 617 aa22.37■■□□□ 1.17
RETREG3-205ENST00000586870 G3V3G9 751 aa22.36■■□□□ 1.17
RETREG3-205ENST00000586870 UFL1O94874 794 aa22.36■■□□□ 1.17
RETREG3-205ENST00000586870 DCAF8Q5TAQ9 597 aa22.36■■□□□ 1.17
RETREG3-205ENST00000586870 KLHDC4Q8TBB5 520 aa22.36■■□□□ 1.17
RETREG3-205ENST00000586870 PODXL2Q9NZ53 605 aa22.36■■□□□ 1.17
RETREG3-205ENST00000586870 MAP4K4O95819 1239 aaPredicted RBP22.35■■□□□ 1.17
RETREG3-205ENST00000586870 ATP2B4P23634 1241 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 KCNJ4P48050 445 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 AOC3Q16853 763 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 TBC1D16Q8TBP0 767 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 ZC3H12CQ9C0D7 883 aaKnown RBP22.35■■□□□ 1.17
RETREG3-205ENST00000586870 RIMBP2O15034 1052 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 ANAPC15P60006 121 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 CHRNDQ07001 517 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 DPY19L2Q6NUT2 758 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 NIM1KQ8IY84 436 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 ZNF526Q8TF50 670 aaPredicted RBP22.35■■□□□ 1.17
RETREG3-205ENST00000586870 EVI5LQ96CN4 794 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 POLLQ9UGP5 575 aa22.35■■□□□ 1.17
RETREG3-205ENST00000586870 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
RETREG3-205ENST00000586870 ANO2Q9NQ90 1003 aa22.34■■□□□ 1.17
RETREG3-205ENST00000586870 SGSM2O43147 1006 aa22.33■■□□□ 1.17
RETREG3-205ENST00000586870 CD2BP2O95400 341 aaKnown RBP22.33■■□□□ 1.17
RETREG3-205ENST00000586870 IL27Q8NEV9 243 aa22.33■■□□□ 1.17
RETREG3-205ENST00000586870 RUFY2Q8WXA3 655 aa22.33■■□□□ 1.17
RETREG3-205ENST00000586870 IL17RAQ96F46 866 aa22.33■■□□□ 1.17
RETREG3-205ENST00000586870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.33■■□□□ 1.17
RETREG3-205ENST00000586870 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.16
RETREG3-205ENST00000586870 SNED1Q8TER0 1413 aa22.32■■□□□ 1.16
RETREG3-205ENST00000586870 ST18O60284 1047 aa22.32■■□□□ 1.16
RETREG3-205ENST00000586870 KIAA2012Q0VF49 1180 aa22.32■■□□□ 1.16
RETREG3-205ENST00000586870 HELBQ8NG08 1087 aaPredicted RBP22.32■■□□□ 1.16
RETREG3-205ENST00000586870 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
RETREG3-205ENST00000586870 LEMD3Q9Y2U8 911 aa22.32■■□□□ 1.16
RETREG3-205ENST00000586870 TAF1P21675 1872 aa22.32■■□□□ 1.16
RETREG3-205ENST00000586870 DDIT3P35638 169 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 EIF6P56537 245 aaKnown RBP22.31■■□□□ 1.16
RETREG3-205ENST00000586870 COL4A1P02462 1669 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 TAF5LO75529 589 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 TFCP2Q12800 502 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 TNNI3KQ59H18 835 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 GPR101Q96P66 508 aaPredicted RBP22.31■■□□□ 1.16
RETREG3-205ENST00000586870 PUS3Q9BZE2 481 aaKnown RBP22.31■■□□□ 1.16
RETREG3-205ENST00000586870 FPGT-TNNI3KV9GXZ4 949 aa22.31■■□□□ 1.16
RETREG3-205ENST00000586870 MYH3P11055 1940 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 HIP1O00291 1037 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 FRAT2O75474 233 aaPredicted RBP22.3■■□□□ 1.16
RETREG3-205ENST00000586870 METTL24Q5JXM2 366 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 GPBP1L1Q9HC44 474 aaPredicted RBP22.3■■□□□ 1.16
RETREG3-205ENST00000586870 DIAPH3Q9NSV4 1193 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 FER1L6Q2WGJ9 1857 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 ZNF804BA4D1E1 1349 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 MROH5Q6ZUA9 1318 aa22.3■■□□□ 1.16
RETREG3-205ENST00000586870 LRRC24Q50LG9 513 aa22.29■■□□□ 1.16
RETREG3-205ENST00000586870 ZNF784Q8NCA9 323 aaPredicted RBP22.29■■□□□ 1.16
RETREG3-205ENST00000586870 GPR108Q9NPR9 543 aa22.29■■□□□ 1.16
RETREG3-205ENST00000586870 EYA2O00167 538 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 HSP90AA1P07900 732 aaKnown RBP22.28■■□□□ 1.16
RETREG3-205ENST00000586870 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-205ENST00000586870 TLR7Q9NYK1 1049 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms