RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 BCAR3O75815 825 aa13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 ITGBL1O95965 494 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 TRIM27P14373 513 aa13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 ZNF594Q96JF6 807 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-209ENST00000586122 MAP1SQ66K74 1059 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-209ENST00000586122 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-209ENST00000586122 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-209ENST00000586122 RIPOR2Q9Y4F9 1068 aa13.01□□□□□ -0.33
SMARCA4-209ENST00000586122 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 TAF5LO75529 589 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 USP17L8P0C7I0 530 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 ZNF280AP59817 542 aaPredicted RBP13□□□□□ -0.33
SMARCA4-209ENST00000586122 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
SMARCA4-209ENST00000586122 GMLQ99445 158 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 CD209Q9NNX6 404 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
SMARCA4-209ENST00000586122 TMEM88BA6NKF7 163 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 EYA2O00167 538 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 CIAO1O76071 339 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 IL1R1P14778 569 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 DACT2Q5SW24 774 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 TTLL5Q6EMB2 1281 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 OGFOD1Q8N543 542 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 KLRG1Q96E93 195 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 MEIS3Q99687 375 aa12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 LRRFIP2Q9Y608 721 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 POLR2AP24928 1970 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-209ENST00000586122 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 WTIPA6NIX2 430 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 PLIN1O60240 522 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 PDE8BO95263 885 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 MS4A1P11836 297 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 KLRK1P26718 216 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 MTX1Q13505 466 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 PUS3Q9BZE2 481 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
SMARCA4-209ENST00000586122 GNAI2P04899 355 aa12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 HIRAP54198 1017 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 PUM3Q15397 648 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 TBC1D10BQ4KMP7 808 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 LRRC24Q50LG9 513 aa12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 COPRSQ9NQ92 184 aa12.97□□□□□ -0.33
SMARCA4-209ENST00000586122 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 SHTN1A0MZ66 631 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 SASH1O94885 1247 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 IFIT1P09914 478 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 GTF2IP78347 998 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 CAVIN4Q5BKX8 364 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 CLUAP1Q96AJ1 413 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
SMARCA4-209ENST00000586122 ARAP2Q8WZ64 1704 aa12.96□□□□□ -0.34
SMARCA4-209ENST00000586122 FAM205AQ6ZU69 1335 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 SNAP23O00161 211 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 IL15P40933 162 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 VPS37DQ86XT2 251 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 TMEM57Q8N5G2 664 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 JMYQ8N9B5 988 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
SMARCA4-209ENST00000586122 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 SLC5A1P13866 664 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 HTRA3P83110 453 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 LPIN2Q92539 896 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
SMARCA4-209ENST00000586122 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 ZBTB22O15209 634 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 EGFRP00533 1210 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 FGFR2P21802 821 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 GYG1P46976 350 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 ATG9AQ7Z3C6 839 aa12.93□□□□□ -0.34
SMARCA4-209ENST00000586122 ITPRIPQ8IWB1 547 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms