RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PDE8BO95263 885 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 ATP2B4P23634 1241 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 TFCP2Q12800 502 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 TXNRD3Q86VQ6 643 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 KLRG1Q96E93 195 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
VMP1-202ENST00000585847 GGA1Q9UJY5 639 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
VMP1-202ENST00000585847 ZNF804BA4D1E1 1349 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 UFL1O94874 794 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 HTRA3P83110 453 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
VMP1-202ENST00000585847 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 KIF1BPQ96EK5 621 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 LRRCC1Q9C099 1032 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 ANKIB1Q9P2G1 1089 aa15.53■□□□□ 0.08
VMP1-202ENST00000585847 ZNF646O15015 1829 aaPredicted RBP15.52■□□□□ 0.08
VMP1-202ENST00000585847 AOX1Q06278 1338 aa15.52■□□□□ 0.08
VMP1-202ENST00000585847 UBE4AQ14139 1066 aa15.52■□□□□ 0.08
VMP1-202ENST00000585847 C15orf52Q6ZUT6 534 aaKnown RBP15.52■□□□□ 0.08
VMP1-202ENST00000585847 SCN9AQ15858 1988 aa15.52■□□□□ 0.07
VMP1-202ENST00000585847 ZNF609O15014 1411 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 ZC3H4Q9UPT8 1303 aaKnown RBP15.51■□□□□ 0.07
VMP1-202ENST00000585847 C6orf229H3BNL8 230 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 IARSP41252 1262 aaKnown RBP15.51■□□□□ 0.07
VMP1-202ENST00000585847 KIAA2012Q0VF49 1180 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 AOC3Q16853 763 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 ANKRD45Q5TZF3 282 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 RHPN1Q8TCX5 695 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
VMP1-202ENST00000585847 CEP126Q9P2H0 1117 aa15.51■□□□□ 0.07
VMP1-202ENST00000585847 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 LMNB1P20700 586 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 SUPT20HQ8NEM7 779 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 PSME4Q14997 1843 aa15.5■□□□□ 0.07
VMP1-202ENST00000585847 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 ADORA1P30542 326 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 TIMM10P62072 90 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
VMP1-202ENST00000585847 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 WASHC4Q2M389 1173 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 EAF2Q96CJ1 260 aaPredicted RBP15.49■□□□□ 0.07
VMP1-202ENST00000585847 FAM84BQ96KN1 310 aaPredicted RBP15.49■□□□□ 0.07
VMP1-202ENST00000585847 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 OSBPL3Q9H4L5 887 aa15.49■□□□□ 0.07
VMP1-202ENST00000585847 A0A1B0GUL7 405 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 YDJCA8MPS7 323 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 APBB1O00213 710 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 PPIP5K2O43314 1243 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 SMARCA5O60264 1052 aaPredicted RBP15.48■□□□□ 0.07
VMP1-202ENST00000585847 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
VMP1-202ENST00000585847 OS9Q13438 667 aaPredicted RBP15.48■□□□□ 0.07
VMP1-202ENST00000585847 TNNI3KQ59H18 835 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 BMP2KLQ5H9B9 411 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 FBXO33Q7Z6M2 555 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 LPIN2Q92539 896 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 GPATCH3Q96I76 525 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 IL1RAPL2Q9NP60 686 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 FPGT-TNNI3KV9GXZ4 949 aa15.48■□□□□ 0.07
VMP1-202ENST00000585847 GLTPD2A6NH11 291 aa15.47■□□□□ 0.07
VMP1-202ENST00000585847 GYG1P46976 350 aa15.47■□□□□ 0.07
VMP1-202ENST00000585847 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
VMP1-202ENST00000585847 CLASRPQ8N2M8 674 aaKnown RBP15.47■□□□□ 0.07
VMP1-202ENST00000585847 EYA3Q99504 573 aa15.47■□□□□ 0.07
VMP1-202ENST00000585847 LNPKQ9C0E8 428 aa15.47■□□□□ 0.07
VMP1-202ENST00000585847 TLR7Q9NYK1 1049 aaKnown RBP15.47■□□□□ 0.07
VMP1-202ENST00000585847 KCNJ4P48050 445 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 RGS3P49796 1198 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 COL13A1Q5TAT6 717 aaPredicted RBP15.46■□□□□ 0.07
VMP1-202ENST00000585847 LARGE2Q8N3Y3 721 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 XAGE2Q96GT9 111 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 ZC3H12CQ9C0D7 883 aaKnown RBP15.46■□□□□ 0.07
VMP1-202ENST00000585847 DBNDD1Q9H9R9 158 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 KCNQ5Q9NR82 932 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 AKAP11Q9UKA4 1901 aa15.46■□□□□ 0.07
VMP1-202ENST00000585847 FZD9O00144 591 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 CAPN15O75808 1086 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 SLC5A1P13866 664 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 BCAMP50895 628 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 TICAM2Q86XR7 235 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 DBNDD2Q9BQY9 259 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 CCDC8Q9H0W5 538 aaPredicted RBP15.45■□□□□ 0.06
VMP1-202ENST00000585847 CD209Q9NNX6 404 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 DBNLQ9UJU6 430 aaKnown RBP15.45■□□□□ 0.06
VMP1-202ENST00000585847 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
VMP1-202ENST00000585847 TTC41PQ6P2S7 1318 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 ECE2O60344 883 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 IFIT1P09914 478 aaKnown RBP15.44■□□□□ 0.06
VMP1-202ENST00000585847 IL1R1P14778 569 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 PHKA1P46020 1223 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 DPY19L2Q6NUT2 758 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 TNS4Q8IZW8 715 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 TDRD7Q8NHU6 1098 aaKnown RBP15.44■□□□□ 0.06
VMP1-202ENST00000585847 COA1Q9GZY4 146 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms