RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 PLAURQ03405 335 aa8.05□□□□□ -1.12
CRLF3-206ENST00000585268 ECM1Q16610 540 aa8.05□□□□□ -1.12
CRLF3-206ENST00000585268 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
CRLF3-206ENST00000585268 PSAPL1Q6NUJ1 521 aa8.05□□□□□ -1.12
CRLF3-206ENST00000585268 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
CRLF3-206ENST00000585268 GLI2P10070 1586 aa8.05□□□□□ -1.12
CRLF3-206ENST00000585268 BRD1O95696 1058 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 NID1P14543 1247 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 PERM1Q5SV97 790 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 OR13H1Q8NG92 308 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 DCAF5Q96JK2 942 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
CRLF3-206ENST00000585268 LPIN3Q9BQK8 851 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 GGNBP2Q9H3C7 697 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 JPH1Q9HDC5 661 aaPredicted RBP8.04□□□□□ -1.12
CRLF3-206ENST00000585268 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
CRLF3-206ENST00000585268 CASKIN1Q8WXD9 1431 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 A6NHS1 94 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 LILRB5O75023 590 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 RPLP1P05386 114 aaKnown RBP8.03□□□□□ -1.12
CRLF3-206ENST00000585268 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 GLYCTKQ8IVS8 523 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 ELP3Q9H9T3 547 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 ABI2Q9NYB9 513 aaPredicted RBP8.03□□□□□ -1.12
CRLF3-206ENST00000585268 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
CRLF3-206ENST00000585268 FRRS1LQ9P0K9 344 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 TMEM63CQ9P1W3 806 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 CD109Q6YHK3 1445 aa8.03□□□□□ -1.12
CRLF3-206ENST00000585268 PCF11O94913 1555 aaKnown RBP8.02□□□□□ -1.13
CRLF3-206ENST00000585268 PCSK2P16519 638 aa8.02□□□□□ -1.13
CRLF3-206ENST00000585268 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.13
CRLF3-206ENST00000585268 XKR5Q6UX68 686 aa8.02□□□□□ -1.13
CRLF3-206ENST00000585268 ZNF438Q7Z4V0 828 aa8.02□□□□□ -1.13
CRLF3-206ENST00000585268 CCER1Q8TC90 406 aaPredicted RBP8.02□□□□□ -1.13
CRLF3-206ENST00000585268 PLVAPQ9BX97 442 aa8.02□□□□□ -1.13
CRLF3-206ENST00000585268 CCDC87Q9NVE4 849 aa8.02□□□□□ -1.13
CRLF3-206ENST00000585268 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
CRLF3-206ENST00000585268 LOC102724428A0A0B4J2F2 783 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 J3QW42 95 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 RGS9O75916 674 aaPredicted RBP8.01□□□□□ -1.13
CRLF3-206ENST00000585268 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
CRLF3-206ENST00000585268 SIK1P57059 783 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 AAMPQ13685 434 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 C8orf34Q49A92 452 aa8.01□□□□□ -1.13
CRLF3-206ENST00000585268 COL13A1Q5TAT6 717 aaPredicted RBP8.01□□□□□ -1.13
CRLF3-206ENST00000585268 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
CRLF3-206ENST00000585268 CYP2E1P05181 493 aaPredicted RBP8□□□□□ -1.13
CRLF3-206ENST00000585268 GRIK5Q16478 980 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 TTC39BQ5VTQ0 682 aaPredicted RBP8□□□□□ -1.13
CRLF3-206ENST00000585268 ELMSAN1Q6PJG2 1045 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 GJD3Q8N144 294 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 SMG9Q9H0W8 520 aaKnown RBP8□□□□□ -1.13
CRLF3-206ENST00000585268 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
CRLF3-206ENST00000585268 TSPOAP1O95153 1857 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 FYCO1Q9BQS8 1478 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 MAP3K4Q9Y6R4 1608 aa8□□□□□ -1.13
CRLF3-206ENST00000585268 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 KIF4AO95239 1232 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 IGHA1P01876 353 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 USP5P45974 858 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 TTC9Q92623 222 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 TRAIPQ9BWF2 469 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 CNTN3Q9P232 1028 aa7.99□□□□□ -1.13
CRLF3-206ENST00000585268 COL17A1Q9UMD9 1497 aaPredicted RBP7.99□□□□□ -1.13
CRLF3-206ENST00000585268 PPRC1Q5VV67 1664 aaKnown RBP7.98□□□□□ -1.13
CRLF3-206ENST00000585268 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 TROQ12816 1431 aaPredicted RBP7.98□□□□□ -1.13
CRLF3-206ENST00000585268 SOWAHDA6NJG2 315 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 GHRHP01286 108 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 ITGB2P05107 769 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 PLD4Q96BZ4 506 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 CHRDQ9H2X0 955 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.98□□□□□ -1.13
CRLF3-206ENST00000585268 LRRIQ1Q96JM4 1722 aa7.98□□□□□ -1.13
CRLF3-206ENST00000585268 VPS8Q8N3P4 1428 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 ABCA9Q8IUA7 1624 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 SPDYE3A6NKU9 549 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 EHHADHQ08426 723 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 HYAL2Q12891 473 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 PLA2G4EQ3MJ16 856 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 C1orf127Q8N9H9 656 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 TTC16Q8NEE8 873 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 KANSL3Q9P2N6 904 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.97□□□□□ -1.13
CRLF3-206ENST00000585268 CCDC18Q5T9S5 1454 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 TEX14Q8IWB6 1497 aa7.97□□□□□ -1.13
CRLF3-206ENST00000585268 CFAP43Q8NDM7 1665 aa7.96□□□□□ -1.13
CRLF3-206ENST00000585268 TNFRSF21O75509 655 aa7.96□□□□□ -1.14
CRLF3-206ENST00000585268 SPATA31C1P0DKV0 1188 aa7.96□□□□□ -1.14
CRLF3-206ENST00000585268 RBSNQ9H1K0 784 aa7.96□□□□□ -1.14
CRLF3-206ENST00000585268 BRPF3Q9ULD4 1205 aa7.96□□□□□ -1.14
CRLF3-206ENST00000585268 FAM229AH3BQW9 127 aa7.95□□□□□ -1.14
CRLF3-206ENST00000585268 ATP11AP98196 1134 aa7.95□□□□□ -1.14
CRLF3-206ENST00000585268 TRAPPC3LQ5T215 181 aa7.95□□□□□ -1.14
CRLF3-206ENST00000585268 MSL1Q68DK7 614 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms