RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MYO3BQ8WXR4 1341 aa15.56■□□□□ 0.08
SS18-225ENST00000585121 PLIN1O60240 522 aa15.56■□□□□ 0.08
SS18-225ENST00000585121 TAF5LO75529 589 aa15.56■□□□□ 0.08
SS18-225ENST00000585121 CELF2O95319 508 aaKnown RBP15.56■□□□□ 0.08
SS18-225ENST00000585121 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
SS18-225ENST00000585121 OGFOD1Q8N543 542 aa15.56■□□□□ 0.08
SS18-225ENST00000585121 BICC1Q9H694 974 aaKnown RBP15.56■□□□□ 0.08
SS18-225ENST00000585121 NOB1Q9ULX3 412 aaKnown RBP15.56■□□□□ 0.08
SS18-225ENST00000585121 RASSF10A6NK89 507 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 BRPF1P55201 1214 aaPredicted RBP15.55■□□□□ 0.08
SS18-225ENST00000585121 ZNF280AP59817 542 aaPredicted RBP15.55■□□□□ 0.08
SS18-225ENST00000585121 TTLL5Q6EMB2 1281 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 KRT26Q7Z3Y9 468 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 ZNF804AQ7Z570 1209 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 USP48Q86UV5 1035 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 TXNRD3Q86VQ6 643 aa15.55■□□□□ 0.08
SS18-225ENST00000585121 VEGFBP49765 207 aa15.54■□□□□ 0.08
SS18-225ENST00000585121 MMP14P50281 582 aa15.54■□□□□ 0.08
SS18-225ENST00000585121 HNRNPUQ00839 825 aaKnown RBP eCLIP15.54■□□□□ 0.08
SS18-225ENST00000585121 FMR1Q06787 632 aaKnown RBP eCLIP15.54■□□□□ 0.08
SS18-225ENST00000585121 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
SS18-225ENST00000585121 PAXIP1Q6ZW49 1069 aaPredicted RBP15.54■□□□□ 0.08
SS18-225ENST00000585121 ZNF408Q9H9D4 720 aa15.54■□□□□ 0.08
SS18-225ENST00000585121 HDAC5Q9UQL6 1122 aa15.54■□□□□ 0.08
SS18-225ENST00000585121 ZNF609O15014 1411 aa15.54■□□□□ 0.08
SS18-225ENST00000585121 KLRK1P26718 216 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 RARSP54136 660 aaKnown RBP15.53■□□□□ 0.08
SS18-225ENST00000585121 RABL6Q3YEC7 729 aaPredicted RBP15.53■□□□□ 0.08
SS18-225ENST00000585121 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 CST9Q5W186 159 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 SULF1Q8IWU6 871 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 KAZALD1Q96I82 304 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 GMLQ99445 158 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 USP44Q9H0E7 712 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 MYOZ2Q9NPC6 264 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 SPEF2Q9C093 1822 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 KIF16BQ96L93 1317 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 PCNTO95613 3336 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 EGFRP00533 1210 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 HSPA1AP0DMV8 641 aaKnown RBP15.53■□□□□ 0.08
SS18-225ENST00000585121 HSPA1BP0DMV9 641 aaKnown RBP15.53■□□□□ 0.08
SS18-225ENST00000585121 ECE1P42892 770 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 GTF2IP78347 998 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 SCARF1Q14162 830 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 HDAC9Q9UKV0 1011 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 TLL2Q9Y6L7 1015 aa15.53■□□□□ 0.08
SS18-225ENST00000585121 MROH5Q6ZUA9 1318 aa15.52■□□□□ 0.07
SS18-225ENST00000585121 SNAP23O00161 211 aa15.52■□□□□ 0.07
SS18-225ENST00000585121 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.07
SS18-225ENST00000585121 UBTFL1P0CB47 393 aaPredicted RBP15.52■□□□□ 0.07
SS18-225ENST00000585121 UBE4AQ14139 1066 aa15.52■□□□□ 0.07
SS18-225ENST00000585121 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.07
SS18-225ENST00000585121 GGA3Q9NZ52 723 aa15.52■□□□□ 0.07
SS18-225ENST00000585121 SCN9AQ15858 1988 aa15.51■□□□□ 0.07
SS18-225ENST00000585121 ARHGAP45Q92619 1136 aa15.51■□□□□ 0.07
SS18-225ENST00000585121 AIDAQ96BJ3 306 aa15.51■□□□□ 0.07
SS18-225ENST00000585121 PUS3Q9BZE2 481 aaKnown RBP15.51■□□□□ 0.07
SS18-225ENST00000585121 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
SS18-225ENST00000585121 GRM1Q13255 1194 aa15.5■□□□□ 0.07
SS18-225ENST00000585121 METTL24Q5JXM2 366 aa15.5■□□□□ 0.07
SS18-225ENST00000585121 MXD3Q9BW11 206 aa15.5■□□□□ 0.07
SS18-225ENST00000585121 RIPOR2Q9Y4F9 1068 aa15.5■□□□□ 0.07
SS18-225ENST00000585121 IL1R1P14778 569 aa15.49■□□□□ 0.07
SS18-225ENST00000585121 ANGEL2Q5VTE6 544 aaKnown RBP15.49■□□□□ 0.07
SS18-225ENST00000585121 SAPCD2Q86UD0 394 aa15.49■□□□□ 0.07
SS18-225ENST00000585121 C2orf69Q8N8R5 385 aa15.49■□□□□ 0.07
SS18-225ENST00000585121 CAPNS2Q96L46 248 aa15.49■□□□□ 0.07
SS18-225ENST00000585121 ADM5C9JUS6 153 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 HIBADHP31937 336 aaKnown RBP15.48■□□□□ 0.07
SS18-225ENST00000585121 MAP2K1Q02750 393 aaPredicted RBP15.48■□□□□ 0.07
SS18-225ENST00000585121 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 KIAA0825Q8IV33 1275 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 HHIPL1Q96JK4 782 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 PITPNM2Q9BZ72 1349 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 IRS2Q9Y4H2 1338 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 LRRC24Q50LG9 513 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 CYP4F22Q6NT55 531 aa15.48■□□□□ 0.07
SS18-225ENST00000585121 SASH1O94885 1247 aa15.47■□□□□ 0.07
SS18-225ENST00000585121 HUNKP57058 714 aa15.47■□□□□ 0.07
SS18-225ENST00000585121 FKBP1AP62942 108 aaKnown RBP15.47■□□□□ 0.07
SS18-225ENST00000585121 CAVIN4Q5BKX8 364 aa15.47■□□□□ 0.07
SS18-225ENST00000585121 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
SS18-225ENST00000585121 GBA2Q9HCG7 927 aaPredicted RBP15.47■□□□□ 0.07
SS18-225ENST00000585121 TRPM7Q96QT4 1865 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 ASTN2O75129 1339 aaPredicted RBP15.46■□□□□ 0.07
SS18-225ENST00000585121 FRAT2O75474 233 aaPredicted RBP15.46■□□□□ 0.07
SS18-225ENST00000585121 PDE8BO95263 885 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 GNAI3P08754 354 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 NBPF9Q3BBW0 867 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 KLHDC4Q8TBB5 520 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 BEGAINQ9BUH8 593 aa15.46■□□□□ 0.07
SS18-225ENST00000585121 EYA2O00167 538 aa15.45■□□□□ 0.06
SS18-225ENST00000585121 WNT10BO00744 389 aa15.45■□□□□ 0.06
SS18-225ENST00000585121 IFIT1P09914 478 aaKnown RBP15.45■□□□□ 0.06
SS18-225ENST00000585121 MAP2K2P36507 400 aa15.45■□□□□ 0.06
SS18-225ENST00000585121 GYG1P46976 350 aa15.45■□□□□ 0.06
SS18-225ENST00000585121 DLGAP5Q15398 846 aa15.45■□□□□ 0.06
SS18-225ENST00000585121 INTS3Q68E01 1043 aaKnown RBP15.45■□□□□ 0.06
SS18-225ENST00000585121 DLK2Q6UY11 383 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms