RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 LTBP3Q9NS15 1303 aa14.33□□□□□ -0.12
CDRT1-207ENST00000583965 MED23Q9ULK4 1368 aa14.33□□□□□ -0.12
CDRT1-207ENST00000583965 C6orf229H3BNL8 230 aa14.32□□□□□ -0.12
CDRT1-207ENST00000583965 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
CDRT1-207ENST00000583965 FKBP4Q02790 459 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDRT1-207ENST00000583965 SLC51AQ86UW1 340 aa14.32□□□□□ -0.12
CDRT1-207ENST00000583965 AACSQ86V21 672 aa14.32□□□□□ -0.12
CDRT1-207ENST00000583965 EAF2Q96CJ1 260 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-207ENST00000583965 POLLQ9UGP5 575 aa14.32□□□□□ -0.12
CDRT1-207ENST00000583965 WWC3Q9ULE0 1092 aa14.32□□□□□ -0.12
CDRT1-207ENST00000583965 TIMM10P62072 90 aa14.31□□□□□ -0.12
CDRT1-207ENST00000583965 NEUROD6Q96NK8 337 aa14.31□□□□□ -0.12
CDRT1-207ENST00000583965 LNPKQ9C0E8 428 aa14.31□□□□□ -0.12
CDRT1-207ENST00000583965 MYH7P12883 1935 aa14.31□□□□□ -0.12
CDRT1-207ENST00000583965 CAVIN4Q5BKX8 364 aa14.3□□□□□ -0.12
CDRT1-207ENST00000583965 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
CDRT1-207ENST00000583965 XAGE2Q96GT9 111 aa14.3□□□□□ -0.12
CDRT1-207ENST00000583965 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
CDRT1-207ENST00000583965 TAOK3Q9H2K8 898 aa14.3□□□□□ -0.12
CDRT1-207ENST00000583965 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
CDRT1-207ENST00000583965 SNAP23O00161 211 aa14.29□□□□□ -0.12
CDRT1-207ENST00000583965 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDRT1-207ENST00000583965 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
CDRT1-207ENST00000583965 GORABQ5T7V8 394 aa14.29□□□□□ -0.12
CDRT1-207ENST00000583965 ZC3H12CQ9C0D7 883 aaKnown RBP14.29□□□□□ -0.12
CDRT1-207ENST00000583965 CCDC8Q9H0W5 538 aaPredicted RBP14.29□□□□□ -0.12
CDRT1-207ENST00000583965 DBNLQ9UJU6 430 aaKnown RBP14.29□□□□□ -0.12
CDRT1-207ENST00000583965 MYO5AQ9Y4I1 1855 aaKnown RBP14.29□□□□□ -0.12
CDRT1-207ENST00000583965 SCN9AQ15858 1988 aa14.29□□□□□ -0.12
CDRT1-207ENST00000583965 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
CDRT1-207ENST00000583965 NFKBIEO00221 500 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 ZNF646O15015 1829 aaPredicted RBP14.28□□□□□ -0.12
CDRT1-207ENST00000583965 ZBTB22O15209 634 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 GRIN3BO60391 1043 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 ADORA1P30542 326 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 GPR162Q16538 588 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 ZNF804AQ7Z570 1209 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 FBXO33Q7Z6M2 555 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 DBNDD2Q9BQY9 259 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 SALL3Q9BXA9 1300 aa14.28□□□□□ -0.12
CDRT1-207ENST00000583965 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
CDRT1-207ENST00000583965 AOX1Q06278 1338 aa14.27□□□□□ -0.12
CDRT1-207ENST00000583965 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.12
CDRT1-207ENST00000583965 MX1P20591 662 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 HIBADHP31937 336 aaKnown RBP14.27□□□□□ -0.13
CDRT1-207ENST00000583965 ARHGAP27Q6ZUM4 889 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.13
CDRT1-207ENST00000583965 FAM84BQ96KN1 310 aaPredicted RBP14.27□□□□□ -0.13
CDRT1-207ENST00000583965 COA1Q9GZY4 146 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 GNL3LQ9NVN8 582 aaKnown RBP14.27□□□□□ -0.13
CDRT1-207ENST00000583965 TLR7Q9NYK1 1049 aaKnown RBP14.27□□□□□ -0.13
CDRT1-207ENST00000583965 STAP2Q9UGK3 403 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 DOCK2Q92608 1830 aa14.27□□□□□ -0.13
CDRT1-207ENST00000583965 SEMA3EO15041 775 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 PPIP5K2O43314 1243 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 UQCRFS1P1P0C7P4 283 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 KLRK1P26718 216 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 ARID4AP29374 1257 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-207ENST00000583965 IARSP41252 1262 aaKnown RBP14.26□□□□□ -0.13
CDRT1-207ENST00000583965 GYG1P46976 350 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 CCDC102BQ68D86 513 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-207ENST00000583965 GPR101Q96P66 508 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-207ENST00000583965 OSBPL3Q9H4L5 887 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 ECHDC1Q9NTX5 307 aa14.26□□□□□ -0.13
CDRT1-207ENST00000583965 G3V3G9 751 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 ERC2O15083 957 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 IL1R1P14778 569 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PDE4AP27815 886 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PHKA1P46020 1223 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 BCAMP50895 628 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PDE1AP54750 535 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 AOC3Q16853 763 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 TTC39AQ5SRH9 613 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PLEKHM2Q8IWE5 1019 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 LARGE2Q8N3Y3 721 aa14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDRT1-207ENST00000583965 ZNF277Q9NRM2 450 aaPredicted RBP14.25□□□□□ -0.13
CDRT1-207ENST00000583965 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
CDRT1-207ENST00000583965 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 ATP5JP18859 108 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 LMNB1P20700 586 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 RASSF7Q02833 373 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 OTUD7AQ8TE49 926 aaPredicted RBP14.24□□□□□ -0.13
CDRT1-207ENST00000583965 CD209Q9NNX6 404 aa14.24□□□□□ -0.13
CDRT1-207ENST00000583965 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
CDRT1-207ENST00000583965 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
CDRT1-207ENST00000583965 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
CDRT1-207ENST00000583965 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
CDRT1-207ENST00000583965 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
CDRT1-207ENST00000583965 COL4A5P29400 1685 aa14.23□□□□□ -0.13
CDRT1-207ENST00000583965 MYH2Q9UKX2 1941 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms