RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-216ENST00000583804 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
TOP3A-216ENST00000583804 A0A1B0GUL7 405 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 NFKBIEO00221 500 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 GRIN3BO60391 1043 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 PDE4AP27815 886 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 RASSF7Q02833 373 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 CHD1LQ86WJ1 897 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 C16orf71Q8IYS4 520 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-216ENST00000583804 PSMD1Q99460 953 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 RTFDC1Q9BY42 306 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-216ENST00000583804 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-216ENST00000583804 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
TOP3A-216ENST00000583804 G3V3G9 751 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
TOP3A-216ENST00000583804 FGFR2P21802 821 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 KLRK1P26718 216 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 NUCB1Q02818 461 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 GORABQ5T7V8 394 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-216ENST00000583804 EAF2Q96CJ1 260 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-216ENST00000583804 LRRC37AA6NMS7 1700 aa13.45□□□□□ -0.26
TOP3A-216ENST00000583804 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 ADORA1P30542 326 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 GYG1P46976 350 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 AOC3Q16853 763 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
TOP3A-216ENST00000583804 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
TOP3A-216ENST00000583804 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 TSHZ3Q63HK5 1081 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 LARGE2Q8N3Y3 721 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 DBNDD2Q9BQY9 259 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
TOP3A-216ENST00000583804 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 TLR7Q9NYK1 1049 aaKnown RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 DUOX1Q9NRD9 1551 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 ZNF609O15014 1411 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 MED23Q9ULK4 1368 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 LMNB1P20700 586 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 BCAMP50895 628 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 C15orf52Q6ZUT6 534 aaKnown RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 ZNF804AQ7Z570 1209 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 DBNDD1Q9H9R9 158 aa13.42□□□□□ -0.26
TOP3A-216ENST00000583804 DBNLQ9UJU6 430 aaKnown RBP13.42□□□□□ -0.26
TOP3A-216ENST00000583804 LTBP1Q14766 1721 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
TOP3A-216ENST00000583804 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
TOP3A-216ENST00000583804 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
TOP3A-216ENST00000583804 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 PHKA1P46020 1223 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 PRELPP51888 382 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 COA1Q9GZY4 146 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
TOP3A-216ENST00000583804 IQSEC3Q9UPP2 1182 aaPredicted RBP13.4□□□□□ -0.26
TOP3A-216ENST00000583804 ECE2O60344 883 aa13.39□□□□□ -0.27
TOP3A-216ENST00000583804 C9orf131Q5VYM1 1079 aa13.39□□□□□ -0.27
TOP3A-216ENST00000583804 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
TOP3A-216ENST00000583804 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
TOP3A-216ENST00000583804 FBXW7Q969H0 707 aa13.38□□□□□ -0.27
TOP3A-216ENST00000583804 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
TOP3A-216ENST00000583804 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
TOP3A-216ENST00000583804 MX1P20591 662 aa13.37□□□□□ -0.27
TOP3A-216ENST00000583804 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
TOP3A-216ENST00000583804 JAG2Q9Y219 1238 aa13.37□□□□□ -0.27
TOP3A-216ENST00000583804 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
TOP3A-216ENST00000583804 RAD17O75943 681 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 IL1R1P14778 569 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-216ENST00000583804 PLEKHM2Q8IWE5 1019 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 TDRD7Q8NHU6 1098 aaKnown RBP13.36□□□□□ -0.27
TOP3A-216ENST00000583804 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 SNRKQ9NRH2 765 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
TOP3A-216ENST00000583804 PDE1AP54750 535 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 EIF6P56537 245 aaKnown RBP13.36□□□□□ -0.27
TOP3A-216ENST00000583804 GTF2IP78347 998 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 SCARF1Q14162 830 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
TOP3A-216ENST00000583804 YDJCA8MPS7 323 aa13.35□□□□□ -0.27
TOP3A-216ENST00000583804 SEMA3EO15041 775 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms