RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 G3BP1Q13283 466 aaKnown RBP eCLIP26.85■■□□□ 1.89
TSEN54-208ENST00000583173 DPY19L2Q6NUT2 758 aa26.85■■□□□ 1.89
TSEN54-208ENST00000583173 PODNQ7Z5L7 613 aa26.85■■□□□ 1.89
TSEN54-208ENST00000583173 FAM84BQ96KN1 310 aaPredicted RBP26.85■■□□□ 1.89
TSEN54-208ENST00000583173 COA1Q9GZY4 146 aa26.85■■□□□ 1.89
TSEN54-208ENST00000583173 POTECB2RU33 542 aa26.84■■□□□ 1.89
TSEN54-208ENST00000583173 SURF6O75683 361 aaKnown RBP26.84■■□□□ 1.89
TSEN54-208ENST00000583173 PUM3Q15397 648 aaKnown RBP26.84■■□□□ 1.89
TSEN54-208ENST00000583173 FBXO33Q7Z6M2 555 aa26.84■■□□□ 1.89
TSEN54-208ENST00000583173 TFCP2Q12800 502 aa26.83■■□□□ 1.89
TSEN54-208ENST00000583173 CD209Q9NNX6 404 aa26.83■■□□□ 1.89
TSEN54-208ENST00000583173 GPC2Q8N158 579 aa26.82■■□□□ 1.88
TSEN54-208ENST00000583173 LPIN2Q92539 896 aa26.82■■□□□ 1.88
TSEN54-208ENST00000583173 TIAM2Q8IVF5 1701 aa26.82■■□□□ 1.88
TSEN54-208ENST00000583173 RAD17O75943 681 aa26.81■■□□□ 1.88
TSEN54-208ENST00000583173 IL1R1P14778 569 aa26.81■■□□□ 1.88
TSEN54-208ENST00000583173 AAMPQ13685 434 aa26.81■■□□□ 1.88
TSEN54-208ENST00000583173 EXOC6Q8TAG9 804 aa26.81■■□□□ 1.88
TSEN54-208ENST00000583173 L3MBTL3Q96JM7 780 aaPredicted RBP26.81■■□□□ 1.88
TSEN54-208ENST00000583173 HMMRO75330 724 aa26.8■■□□□ 1.88
TSEN54-208ENST00000583173 VIL1P09327 827 aaKnown RBP26.8■■□□□ 1.88
TSEN54-208ENST00000583173 CIAPIN1Q6FI81 312 aa26.8■■□□□ 1.88
TSEN54-208ENST00000583173 HIBADHP31937 336 aaKnown RBP26.79■■□□□ 1.88
TSEN54-208ENST00000583173 GYG1P46976 350 aa26.79■■□□□ 1.88
TSEN54-208ENST00000583173 TIMM10P62072 90 aa26.79■■□□□ 1.88
TSEN54-208ENST00000583173 TNIP1Q15025 636 aa26.79■■□□□ 1.88
TSEN54-208ENST00000583173 TDRD7Q8NHU6 1098 aaKnown RBP26.79■■□□□ 1.88
TSEN54-208ENST00000583173 KDM2BQ8NHM5 1336 aa26.79■■□□□ 1.88
TSEN54-208ENST00000583173 G3V3G9 751 aa26.78■■□□□ 1.88
TSEN54-208ENST00000583173 PSMD14O00487 310 aa26.78■■□□□ 1.88
TSEN54-208ENST00000583173 IFIT1P09914 478 aaKnown RBP26.78■■□□□ 1.88
TSEN54-208ENST00000583173 ATP2B3Q16720 1220 aa26.78■■□□□ 1.88
TSEN54-208ENST00000583173 DCAF8Q5TAQ9 597 aa26.78■■□□□ 1.88
TSEN54-208ENST00000583173 GPR108Q9NPR9 543 aa26.78■■□□□ 1.88
TSEN54-208ENST00000583173 SLC5A1P13866 664 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 BCAMP50895 628 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 ZNF804AQ7Z570 1209 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 ZNF526Q8TF50 670 aaPredicted RBP26.77■■□□□ 1.88
TSEN54-208ENST00000583173 RRAGCQ9HB90 399 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 NMRK2Q9NPI5 230 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 EXOC6BQ9Y2D4 811 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 AKAP2Q9Y2D5 859 aa26.77■■□□□ 1.88
TSEN54-208ENST00000583173 ZBTB22O15209 634 aa26.76■■□□□ 1.87
TSEN54-208ENST00000583173 GJA3Q9Y6H8 435 aa26.76■■□□□ 1.87
TSEN54-208ENST00000583173 SCN9AQ15858 1988 aa26.76■■□□□ 1.87
TSEN54-208ENST00000583173 USP17L3A6NCW0 530 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 USP17L4A6NCW7 530 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 STRIP1Q5VSL9 837 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 USP17L1Q7RTZ2 530 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 GMLQ99445 158 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 DCTPP1Q9H773 170 aa26.75■■□□□ 1.87
TSEN54-208ENST00000583173 GPBP1L1Q9HC44 474 aaPredicted RBP26.75■■□□□ 1.87
TSEN54-208ENST00000583173 A0A1B0GUL7 405 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 KIF3CO14782 793 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 ADORA1P30542 326 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 SCNN1DP51172 638 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 HSP90AB4PQ58FF6 505 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 DACT2Q5SW24 774 aa26.74■■□□□ 1.87
TSEN54-208ENST00000583173 WDR90Q96KV7 1748 aa26.73■■□□□ 1.87
TSEN54-208ENST00000583173 VEGFAP15692 232 aaPredicted RBP26.73■■□□□ 1.87
TSEN54-208ENST00000583173 CAVIN4Q5BKX8 364 aa26.73■■□□□ 1.87
TSEN54-208ENST00000583173 TTLL5Q6EMB2 1281 aa26.73■■□□□ 1.87
TSEN54-208ENST00000583173 DPF2Q92785 391 aa26.73■■□□□ 1.87
TSEN54-208ENST00000583173 RAB11FIP3O75154 756 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 GMPSP49915 693 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-208ENST00000583173 OS9Q13438 667 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-208ENST00000583173 TNNI3KQ59H18 835 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 RSBN1LQ6PCB5 846 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-208ENST00000583173 ERC1Q8IUD2 1116 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 RHPN1Q8TCX5 695 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 XAGE2Q96GT9 111 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 ZBTB12Q9Y330 459 aaPredicted RBP26.72■■□□□ 1.87
TSEN54-208ENST00000583173 FPGT-TNNI3KV9GXZ4 949 aa26.72■■□□□ 1.87
TSEN54-208ENST00000583173 FAM205AQ6ZU69 1335 aa26.71■■□□□ 1.87
TSEN54-208ENST00000583173 GTF2IP78347 998 aa26.71■■□□□ 1.87
TSEN54-208ENST00000583173 IRX6P78412 446 aaPredicted RBP26.71■■□□□ 1.87
TSEN54-208ENST00000583173 ZNF609O15014 1411 aa26.71■■□□□ 1.87
TSEN54-208ENST00000583173 RPS12P25398 132 aaKnown RBP26.7■■□□□ 1.86
TSEN54-208ENST00000583173 AGBL3Q8NEM8 1001 aa26.7■■□□□ 1.86
TSEN54-208ENST00000583173 EAF2Q96CJ1 260 aaPredicted RBP26.7■■□□□ 1.86
TSEN54-208ENST00000583173 MXD3Q9BW11 206 aa26.7■■□□□ 1.86
TSEN54-208ENST00000583173 GPRC5DQ9NZD1 345 aa26.7■■□□□ 1.86
TSEN54-208ENST00000583173 EPS15P42566 896 aa26.69■■□□□ 1.86
TSEN54-208ENST00000583173 PHKA1P46020 1223 aa26.69■■□□□ 1.86
TSEN54-208ENST00000583173 FKBP1AP62942 108 aaKnown RBP26.69■■□□□ 1.86
TSEN54-208ENST00000583173 HDAC1Q13547 482 aaPredicted RBP26.69■■□□□ 1.86
TSEN54-208ENST00000583173 KIF1BPQ96EK5 621 aa26.69■■□□□ 1.86
TSEN54-208ENST00000583173 CCDC102BQ68D86 513 aa26.68■■□□□ 1.86
TSEN54-208ENST00000583173 CERS5Q8N5B7 392 aa26.68■■□□□ 1.86
TSEN54-208ENST00000583173 NEUROD6Q96NK8 337 aa26.68■■□□□ 1.86
TSEN54-208ENST00000583173 TAF1DQ9H5J8 278 aaPredicted RBP26.68■■□□□ 1.86
TSEN54-208ENST00000583173 HACL1Q9UJ83 578 aa26.68■■□□□ 1.86
TSEN54-208ENST00000583173 IQCA1LA6NCM1 817 aa26.67■■□□□ 1.86
TSEN54-208ENST00000583173 VPS37DQ86XT2 251 aa26.67■■□□□ 1.86
TSEN54-208ENST00000583173 CNOT7Q9UIV1 285 aaKnown RBP26.67■■□□□ 1.86
TSEN54-208ENST00000583173 SHTN1A0MZ66 631 aa26.66■■□□□ 1.86
TSEN54-208ENST00000583173 IQSEC3Q9UPP2 1182 aaPredicted RBP26.66■■□□□ 1.86
TSEN54-208ENST00000583173 ZNF646O15015 1829 aaPredicted RBP26.65■■□□□ 1.86
TSEN54-208ENST00000583173 PSME4Q14997 1843 aa26.65■■□□□ 1.86
TSEN54-208ENST00000583173 DBNDD2Q9BQY9 259 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms