RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 OTOP1Q7RTM1 612 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 CFHR5Q9BXR6 569 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
TOP3A-210ENST00000580713 PODXL2Q9NZ53 605 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
TOP3A-210ENST00000580713 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
TOP3A-210ENST00000580713 GMLQ99445 158 aa13.97□□□□□ -0.17
TOP3A-210ENST00000580713 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
TOP3A-210ENST00000580713 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
TOP3A-210ENST00000580713 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-210ENST00000580713 SPRYD7Q5W111 196 aa13.96□□□□□ -0.17
TOP3A-210ENST00000580713 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
TOP3A-210ENST00000580713 OGFOD1Q8N543 542 aa13.96□□□□□ -0.17
TOP3A-210ENST00000580713 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.17
TOP3A-210ENST00000580713 CHPF2Q9P2E5 772 aa13.96□□□□□ -0.17
TOP3A-210ENST00000580713 KIAA0100Q14667 2235 aaKnown RBP13.95□□□□□ -0.18
TOP3A-210ENST00000580713 ANP32CO43423 234 aa13.95□□□□□ -0.18
TOP3A-210ENST00000580713 RIPK4P57078 832 aa13.95□□□□□ -0.18
TOP3A-210ENST00000580713 PODNQ7Z5L7 613 aa13.95□□□□□ -0.18
TOP3A-210ENST00000580713 ANGEL1Q9UNK9 670 aaKnown RBP13.95□□□□□ -0.18
TOP3A-210ENST00000580713 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-210ENST00000580713 COL4A1P02462 1669 aa13.95□□□□□ -0.18
TOP3A-210ENST00000580713 MANSC4A6NHS7 340 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-210ENST00000580713 WNT10BO00744 389 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 ZNF609O15014 1411 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 INHBEP58166 350 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 IFNL1Q8IU54 200 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 SLC10A4Q96EP9 437 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 ERO1AQ96HE7 468 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-210ENST00000580713 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 PTPN22Q9Y2R2 807 aa13.94□□□□□ -0.18
TOP3A-210ENST00000580713 XDHP47989 1333 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 SASH1O94885 1247 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
TOP3A-210ENST00000580713 ATP2B4P23634 1241 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 KRT24Q2M2I5 525 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 MIER1Q8N108 512 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 MXD3Q9BW11 206 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 EFCC1Q9HA90 598 aa13.93□□□□□ -0.18
TOP3A-210ENST00000580713 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
TOP3A-210ENST00000580713 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
TOP3A-210ENST00000580713 APOBEC3FQ8IUX4 373 aaKnown RBP13.92□□□□□ -0.18
TOP3A-210ENST00000580713 ANKRD18AQ8IVF6 992 aa13.92□□□□□ -0.18
TOP3A-210ENST00000580713 FZD1Q9UP38 647 aa13.92□□□□□ -0.18
TOP3A-210ENST00000580713 MKI67P46013 3256 aaKnown RBP13.91□□□□□ -0.18
TOP3A-210ENST00000580713 LMOD3Q0VAK6 560 aa13.91□□□□□ -0.18
TOP3A-210ENST00000580713 LDLRAD1Q5T700 205 aa13.91□□□□□ -0.18
TOP3A-210ENST00000580713 ZBTB38Q8NAP3 1195 aaPredicted RBP13.91□□□□□ -0.18
TOP3A-210ENST00000580713 ARMC5Q96C12 935 aa13.91□□□□□ -0.18
TOP3A-210ENST00000580713 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP3A-210ENST00000580713 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
TOP3A-210ENST00000580713 SLC4A8Q2Y0W8 1093 aa13.9□□□□□ -0.18
TOP3A-210ENST00000580713 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
TOP3A-210ENST00000580713 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
TOP3A-210ENST00000580713 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
TOP3A-210ENST00000580713 DBF4Q9UBU7 674 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-210ENST00000580713 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.19
TOP3A-210ENST00000580713 PDE8AO60658 829 aa13.89□□□□□ -0.19
TOP3A-210ENST00000580713 JARID2Q92833 1246 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-210ENST00000580713 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
TOP3A-210ENST00000580713 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
TOP3A-210ENST00000580713 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-210ENST00000580713 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-210ENST00000580713 ZBTB48P10074 688 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-210ENST00000580713 SP3Q02447 781 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 CRHR2Q13324 411 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 STRIP1Q5VSL9 837 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 NBPF11Q86T75 865 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 CLMNQ96JQ2 1002 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-210ENST00000580713 TRIOBPQ9H2D6 2365 aa13.88□□□□□ -0.19
TOP3A-210ENST00000580713 H0YGN5 161 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 DLL1O00548 723 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 MYCP01106 439 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-210ENST00000580713 TMPOP42166 694 aaKnown RBP13.87□□□□□ -0.19
TOP3A-210ENST00000580713 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 CDC5LQ99459 802 aaKnown RBP13.87□□□□□ -0.19
TOP3A-210ENST00000580713 MYD88Q99836 296 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 PSME4Q14997 1843 aa13.87□□□□□ -0.19
TOP3A-210ENST00000580713 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 CHL1O00533 1208 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 PCCAP05165 728 aaPredicted RBP13.86□□□□□ -0.19
TOP3A-210ENST00000580713 MMP14P50281 582 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 EVX2Q03828 476 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 TTLL5Q6EMB2 1281 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
TOP3A-210ENST00000580713 ZNF333Q96JL9 665 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms