RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 AACSQ86V21 672 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 GNL3LQ9NVN8 582 aaKnown RBP17.53■□□□□ 0.4
SKA2-205ENST00000580541 ARFGEF1Q9Y6D6 1849 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 KDM2BQ8NHM5 1336 aa17.52■□□□□ 0.4
SKA2-205ENST00000580541 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
SKA2-205ENST00000580541 TIMM10P62072 90 aa17.52■□□□□ 0.4
SKA2-205ENST00000580541 POLLQ9UGP5 575 aa17.52■□□□□ 0.4
SKA2-205ENST00000580541 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
SKA2-205ENST00000580541 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
SKA2-205ENST00000580541 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
SKA2-205ENST00000580541 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
SKA2-205ENST00000580541 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
SKA2-205ENST00000580541 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
SKA2-205ENST00000580541 EAF2Q96CJ1 260 aaPredicted RBP17.5■□□□□ 0.39
SKA2-205ENST00000580541 XAGE2Q96GT9 111 aa17.5■□□□□ 0.39
SKA2-205ENST00000580541 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
SKA2-205ENST00000580541 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
SKA2-205ENST00000580541 UQCRFS1P1P0C7P4 283 aa17.49■□□□□ 0.39
SKA2-205ENST00000580541 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
SKA2-205ENST00000580541 JDP2Q8WYK2 163 aa17.49■□□□□ 0.39
SKA2-205ENST00000580541 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
SKA2-205ENST00000580541 CCDC8Q9H0W5 538 aaPredicted RBP17.49■□□□□ 0.39
SKA2-205ENST00000580541 COL4A1P02462 1669 aa17.48■□□□□ 0.39
SKA2-205ENST00000580541 RIMBP2O15034 1052 aa17.48■□□□□ 0.39
SKA2-205ENST00000580541 ERC2O15083 957 aa17.48■□□□□ 0.39
SKA2-205ENST00000580541 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
SKA2-205ENST00000580541 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
SKA2-205ENST00000580541 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
SKA2-205ENST00000580541 LARGE2Q8N3Y3 721 aa17.48■□□□□ 0.39
SKA2-205ENST00000580541 SEMA3EO15041 775 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 YBX3P16989 372 aaKnown RBP eCLIP17.47■□□□□ 0.394e-8■□□□□ 8.4
SKA2-205ENST00000580541 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 PODNQ7Z5L7 613 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 FBXO33Q7Z6M2 555 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
SKA2-205ENST00000580541 ZNF609O15014 1411 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
SKA2-205ENST00000580541 FER1L6Q2WGJ9 1857 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 SNAP23O00161 211 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 ZBTB22O15209 634 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 LMNB1P20700 586 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 CCDC102BQ68D86 513 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 ZNF512BQ96KM6 892 aaPredicted RBP17.46■□□□□ 0.39
SKA2-205ENST00000580541 DBNDD2Q9BQY9 259 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
SKA2-205ENST00000580541 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
SKA2-205ENST00000580541 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.39
SKA2-205ENST00000580541 NFKBIEO00221 500 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 MX1P20591 662 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 GYG1P46976 350 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 BCAMP50895 628 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 AOC3Q16853 763 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 NIM1KQ8IY84 436 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 DENND2AQ9ULE3 1009 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
SKA2-205ENST00000580541 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
SKA2-205ENST00000580541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
SKA2-205ENST00000580541 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
SKA2-205ENST00000580541 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 WTIPA6NIX2 430 aaPredicted RBP17.43■□□□□ 0.38
SKA2-205ENST00000580541 GLRX3O76003 335 aaKnown RBP17.43■□□□□ 0.38
SKA2-205ENST00000580541 IL1R1P14778 569 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 ATP5JP18859 108 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 ADORA1P30542 326 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
SKA2-205ENST00000580541 STAP2Q9UGK3 403 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 AOX1Q06278 1338 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
SKA2-205ENST00000580541 ARID4AP29374 1257 aaPredicted RBP17.42■□□□□ 0.38
SKA2-205ENST00000580541 PDE1AP54750 535 aa17.42■□□□□ 0.38
SKA2-205ENST00000580541 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
SKA2-205ENST00000580541 TDRD7Q8NHU6 1098 aaKnown RBP17.42■□□□□ 0.38
SKA2-205ENST00000580541 GPR101Q96P66 508 aaPredicted RBP17.42■□□□□ 0.38
SKA2-205ENST00000580541 OSBPL3Q9H4L5 887 aa17.42■□□□□ 0.38
SKA2-205ENST00000580541 CHD4Q14839 1912 aa17.42■□□□□ 0.38
SKA2-205ENST00000580541 IRS2Q9Y4H2 1338 aa17.42■□□□□ 0.38
SKA2-205ENST00000580541 ECE2O60344 883 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 KLRK1P26718 216 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 PHKA1P46020 1223 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
SKA2-205ENST00000580541 RASSF7Q02833 373 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 SLC51AQ86UW1 340 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
SKA2-205ENST00000580541 WDR66Q8TBY9 1149 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 TBC1D22AQ8WUA7 517 aa17.41■□□□□ 0.38
SKA2-205ENST00000580541 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
SKA2-205ENST00000580541 IGSF3O75054 1194 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 TNIP1Q15025 636 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
SKA2-205ENST00000580541 TTLL5Q6EMB2 1281 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 CNKSR2Q8WXI2 1034 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 PDS5AQ29RF7 1337 aaKnown RBP17.4■□□□□ 0.38
SKA2-205ENST00000580541 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
SKA2-205ENST00000580541 USP17L3A6NCW0 530 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms