RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 PI4KAP2A4QPH2 592 aa17.09■□□□□ 0.33
TRAF4-214ENST00000580073 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
TRAF4-214ENST00000580073 NF2P35240 595 aa17.09■□□□□ 0.33
TRAF4-214ENST00000580073 ANGEL2Q5VTE6 544 aaKnown RBP17.09■□□□□ 0.33
TRAF4-214ENST00000580073 PI4KAP1Q8N8J0 262 aa17.09■□□□□ 0.33
TRAF4-214ENST00000580073 KCNQ5Q9NR82 932 aa17.09■□□□□ 0.33
TRAF4-214ENST00000580073 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-214ENST00000580073 IL16Q14005 1332 aa17.08■□□□□ 0.32
TRAF4-214ENST00000580073 SCARF1Q14162 830 aa17.08■□□□□ 0.32
TRAF4-214ENST00000580073 TWISTNBQ3B726 338 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-214ENST00000580073 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 NEURL1BA8MQ27 555 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 RGS19P49795 217 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 CCT4P50991 539 aaKnown RBP17.07■□□□□ 0.32
TRAF4-214ENST00000580073 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
TRAF4-214ENST00000580073 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 ANKRD2Q9GZV1 360 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
TRAF4-214ENST00000580073 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-214ENST00000580073 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 GMLQ99445 158 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 GREM2Q9H772 168 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
TRAF4-214ENST00000580073 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 RASAL3Q86YV0 1011 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
TRAF4-214ENST00000580073 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 MINPP1Q9UNW1 487 aa17.05■□□□□ 0.32
TRAF4-214ENST00000580073 KCNJ4P48050 445 aa17.04■□□□□ 0.32
TRAF4-214ENST00000580073 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-214ENST00000580073 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
TRAF4-214ENST00000580073 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
TRAF4-214ENST00000580073 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-214ENST00000580073 TRPA1O75762 1119 aa17.03■□□□□ 0.32
TRAF4-214ENST00000580073 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
TRAF4-214ENST00000580073 FLIIQ13045 1269 aa17.03■□□□□ 0.32
TRAF4-214ENST00000580073 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
TRAF4-214ENST00000580073 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
TRAF4-214ENST00000580073 ZIC5Q96T25 663 aa17.03■□□□□ 0.32
TRAF4-214ENST00000580073 RNF186Q9NXI6 227 aa17.03■□□□□ 0.32
TRAF4-214ENST00000580073 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 ASTN2O75129 1339 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-214ENST00000580073 H7C1W4 665 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 ITGA6P23229 1130 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 GCKRQ14397 625 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 DACT2Q5SW24 774 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
TRAF4-214ENST00000580073 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
TRAF4-214ENST00000580073 LINS1Q8NG48 757 aa17.01■□□□□ 0.31
TRAF4-214ENST00000580073 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
TRAF4-214ENST00000580073 SREBF2Q12772 1141 aa17■□□□□ 0.31
TRAF4-214ENST00000580073 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
TRAF4-214ENST00000580073 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
TRAF4-214ENST00000580073 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
TRAF4-214ENST00000580073 CSRNP1Q96S65 589 aa17■□□□□ 0.31
TRAF4-214ENST00000580073 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
TRAF4-214ENST00000580073 WNT10BO00744 389 aa16.99■□□□□ 0.31
TRAF4-214ENST00000580073 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
TRAF4-214ENST00000580073 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
TRAF4-214ENST00000580073 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
TRAF4-214ENST00000580073 MYO1BO43795 1136 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 SASH1O94885 1247 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 CSF1RP07333 972 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 CHRNDQ07001 517 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
TRAF4-214ENST00000580073 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
TRAF4-214ENST00000580073 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
TRAF4-214ENST00000580073 PDE4DIPQ5VU43 2346 aa16.96■□□□□ 0.31
TRAF4-214ENST00000580073 G2E3Q7L622 706 aa16.96■□□□□ 0.31
TRAF4-214ENST00000580073 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.31
TRAF4-214ENST00000580073 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
TRAF4-214ENST00000580073 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
TRAF4-214ENST00000580073 OTOFQ9HC10 1997 aa16.96■□□□□ 0.31
TRAF4-214ENST00000580073 ZNF521Q96K83 1311 aa16.96■□□□□ 0.3
TRAF4-214ENST00000580073 CASP7P55210 303 aa16.95■□□□□ 0.3
TRAF4-214ENST00000580073 GTF2IP78347 998 aa16.95■□□□□ 0.3
TRAF4-214ENST00000580073 DLGAP5Q15398 846 aa16.95■□□□□ 0.3
TRAF4-214ENST00000580073 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
TRAF4-214ENST00000580073 UBE2Q2LH0YL09 131 aa16.94■□□□□ 0.3
TRAF4-214ENST00000580073 ALDH1A1P00352 501 aa16.94■□□□□ 0.3
TRAF4-214ENST00000580073 FKBP1AP62942 108 aaKnown RBP16.94■□□□□ 0.3
TRAF4-214ENST00000580073 C15orf52Q6ZUT6 534 aaKnown RBP16.94■□□□□ 0.3
TRAF4-214ENST00000580073 CD209Q9NNX6 404 aa16.94■□□□□ 0.3
TRAF4-214ENST00000580073 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
TRAF4-214ENST00000580073 SLC34A2O95436 690 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 TM4SF4P48230 202 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 TXNRD3Q86VQ6 643 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 MTMR14Q8NCE2 650 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 MXD3Q9BW11 206 aa16.93■□□□□ 0.3
TRAF4-214ENST00000580073 UNCXA6NJT0 531 aa16.92■□□□□ 0.3
TRAF4-214ENST00000580073 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms