RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 COA1Q9GZY4 146 aa28.14■■■□□ 2.1
NDEL1-207ENST00000580012 PODNQ7Z5L7 613 aa28.13■■■□□ 2.09
NDEL1-207ENST00000580012 FAM84BQ96KN1 310 aaPredicted RBP28.13■■■□□ 2.09
NDEL1-207ENST00000580012 DCTPP1Q9H773 170 aa28.13■■■□□ 2.09
NDEL1-207ENST00000580012 DBNDD1Q9H9R9 158 aa28.13■■■□□ 2.09
NDEL1-207ENST00000580012 GPR108Q9NPR9 543 aa28.13■■■□□ 2.09
NDEL1-207ENST00000580012 EXOC6BQ9Y2D4 811 aa28.13■■■□□ 2.09
NDEL1-207ENST00000580012 FBXO33Q7Z6M2 555 aa28.12■■■□□ 2.09
NDEL1-207ENST00000580012 AKAP2Q9Y2D5 859 aa28.12■■■□□ 2.09
NDEL1-207ENST00000580012 SPEF2Q9C093 1822 aa28.12■■■□□ 2.09
NDEL1-207ENST00000580012 ECE2O60344 883 aa28.11■■■□□ 2.09
NDEL1-207ENST00000580012 ATP2B3Q16720 1220 aa28.11■■■□□ 2.09
NDEL1-207ENST00000580012 GLTPD2A6NH11 291 aa28.1■■■□□ 2.09
NDEL1-207ENST00000580012 RAB11FIP3O75154 756 aa28.1■■■□□ 2.09
NDEL1-207ENST00000580012 IFIT1P09914 478 aaKnown RBP28.1■■■□□ 2.09
NDEL1-207ENST00000580012 CXCL9Q07325 125 aa28.1■■■□□ 2.09
NDEL1-207ENST00000580012 HDAC1Q13547 482 aaPredicted RBP28.1■■■□□ 2.09
NDEL1-207ENST00000580012 ERC1Q8IUD2 1116 aa28.1■■■□□ 2.09
NDEL1-207ENST00000580012 CD209Q9NNX6 404 aa28.1■■■□□ 2.09
NDEL1-207ENST00000580012 SLC5A1P13866 664 aa28.09■■■□□ 2.09
NDEL1-207ENST00000580012 IL1R1P14778 569 aa28.09■■■□□ 2.09
NDEL1-207ENST00000580012 EIF6P56537 245 aaKnown RBP28.09■■■□□ 2.09
NDEL1-207ENST00000580012 TIMM10P62072 90 aa28.09■■■□□ 2.09
NDEL1-207ENST00000580012 OS9Q13438 667 aaPredicted RBP28.09■■■□□ 2.09
NDEL1-207ENST00000580012 GPBP1L1Q9HC44 474 aaPredicted RBP28.09■■■□□ 2.09
NDEL1-207ENST00000580012 KCNQ5Q9NR82 932 aa28.09■■■□□ 2.09
NDEL1-207ENST00000580012 ZNF541Q9H0D2 1346 aa28.09■■■□□ 2.09
NDEL1-207ENST00000580012 HIBADHP31937 336 aaKnown RBP28.08■■■□□ 2.09
NDEL1-207ENST00000580012 GYG1P46976 350 aa28.08■■■□□ 2.09
NDEL1-207ENST00000580012 A0A1B0GUL7 405 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 G3V3G9 751 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 ZBTB22O15209 634 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 DCAF8Q5TAQ9 597 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 DPY19L2Q6NUT2 758 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 ZNF804AQ7Z570 1209 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 RHPN1Q8TCX5 695 aa28.07■■■□□ 2.08
NDEL1-207ENST00000580012 TDRD7Q8NHU6 1098 aaKnown RBP28.06■■■□□ 2.08
NDEL1-207ENST00000580012 ZNF526Q8TF50 670 aaPredicted RBP28.06■■■□□ 2.08
NDEL1-207ENST00000580012 BCAMP50895 628 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 TNNI3KQ59H18 835 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 CAVIN4Q5BKX8 364 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 CIAPIN1Q6FI81 312 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 GPC2Q8N158 579 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 KIF1BPQ96EK5 621 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 FPGT-TNNI3KV9GXZ4 949 aa28.05■■■□□ 2.08
NDEL1-207ENST00000580012 DICER1Q9UPY3 1922 aaKnown RBP28.04■■■□□ 2.08
NDEL1-207ENST00000580012 RAD17O75943 681 aa28.04■■■□□ 2.08
NDEL1-207ENST00000580012 DDNO94850 711 aaPredicted RBP28.04■■■□□ 2.08
NDEL1-207ENST00000580012 VIL1P09327 827 aaKnown RBP28.04■■■□□ 2.08
NDEL1-207ENST00000580012 ADORA1P30542 326 aa28.04■■■□□ 2.08
NDEL1-207ENST00000580012 TNIP1Q15025 636 aa28.04■■■□□ 2.08
NDEL1-207ENST00000580012 A0A1B0GUL6 1792 aa28.04■■■□□ 2.08
NDEL1-207ENST00000580012 EAF2Q96CJ1 260 aaPredicted RBP28.03■■■□□ 2.08
NDEL1-207ENST00000580012 XAGE2Q96GT9 111 aa28.03■■■□□ 2.08
NDEL1-207ENST00000580012 L3MBTL3Q96JM7 780 aaPredicted RBP28.02■■■□□ 2.08
NDEL1-207ENST00000580012 CCDC88AQ3V6T2 1871 aa28.02■■■□□ 2.08
NDEL1-207ENST00000580012 USP17L3A6NCW0 530 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 USP17L4A6NCW7 530 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 PSMD14O00487 310 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 STRIP1Q5VSL9 837 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 USP17L1Q7RTZ2 530 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 NEUROD6Q96NK8 337 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 RWDD1Q9H446 243 aaPredicted RBP28.01■■■□□ 2.07
NDEL1-207ENST00000580012 ZNF609O15014 1411 aa28.01■■■□□ 2.07
NDEL1-207ENST00000580012 KDM2BQ8NHM5 1336 aa28■■■□□ 2.07
NDEL1-207ENST00000580012 IGHDP01880 384 aa28■■■□□ 2.07
NDEL1-207ENST00000580012 DACT2Q5SW24 774 aa28■■■□□ 2.07
NDEL1-207ENST00000580012 FAM205AQ6ZU69 1335 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 POTECB2RU33 542 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 CCDC102BQ68D86 513 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 TTLL5Q6EMB2 1281 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 VPS37DQ86XT2 251 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 IL1RAPL2Q9NP60 686 aa27.99■■■□□ 2.07
NDEL1-207ENST00000580012 PHKA1P46020 1223 aa27.98■■■□□ 2.07
NDEL1-207ENST00000580012 GCC1Q96CN9 775 aa27.98■■■□□ 2.07
NDEL1-207ENST00000580012 GMLQ99445 158 aa27.98■■■□□ 2.07
NDEL1-207ENST00000580012 LRRCC1Q9C099 1032 aa27.98■■■□□ 2.07
NDEL1-207ENST00000580012 GJA3Q9Y6H8 435 aa27.98■■■□□ 2.07
NDEL1-207ENST00000580012 APBB1O00213 710 aa27.97■■■□□ 2.07
NDEL1-207ENST00000580012 GTF2IP78347 998 aa27.97■■■□□ 2.07
NDEL1-207ENST00000580012 RSBN1LQ6PCB5 846 aaPredicted RBP27.97■■■□□ 2.07
NDEL1-207ENST00000580012 CLASRPQ8N2M8 674 aaKnown RBP27.97■■■□□ 2.07
NDEL1-207ENST00000580012 DPF2Q92785 391 aa27.97■■■□□ 2.07
NDEL1-207ENST00000580012 DBNDD2Q9BQY9 259 aa27.97■■■□□ 2.07
NDEL1-207ENST00000580012 DBNLQ9UJU6 430 aaKnown RBP27.97■■■□□ 2.07
NDEL1-207ENST00000580012 FKBP1AP62942 108 aaKnown RBP27.96■■■□□ 2.07
NDEL1-207ENST00000580012 SMC5Q8IY18 1101 aa27.96■■■□□ 2.07
NDEL1-207ENST00000580012 CCDC8Q9H0W5 538 aaPredicted RBP27.96■■■□□ 2.07
NDEL1-207ENST00000580012 GNL3LQ9NVN8 582 aaKnown RBP27.96■■■□□ 2.07
NDEL1-207ENST00000580012 TIAM2Q8IVF5 1701 aa27.95■■■□□ 2.07
NDEL1-207ENST00000580012 SEMA3EO15041 775 aa27.95■■■□□ 2.06
NDEL1-207ENST00000580012 RPS12P25398 132 aaKnown RBP27.95■■■□□ 2.06
NDEL1-207ENST00000580012 GMPSP49915 693 aaPredicted RBP27.95■■■□□ 2.06
NDEL1-207ENST00000580012 SCNN1DP51172 638 aa27.95■■■□□ 2.06
NDEL1-207ENST00000580012 AACSQ86V21 672 aa27.95■■■□□ 2.06
NDEL1-207ENST00000580012 AGBL3Q8NEM8 1001 aa27.95■■■□□ 2.06
NDEL1-207ENST00000580012 ZBTB12Q9Y330 459 aaPredicted RBP27.95■■■□□ 2.06
NDEL1-207ENST00000580012 ZNF512BQ96KM6 892 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-207ENST00000580012 TLR7Q9NYK1 1049 aaKnown RBP27.94■■■□□ 2.06
NDEL1-207ENST00000580012 IQSEC3Q9UPP2 1182 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms