RNA–Protein interactions for RNA: ENST00000579245.1

ARHGAP28-209, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 3

Gene ARHGAP28, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-209ENST00000579245 SPRED3Q2MJR0 410 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 ZNF394Q53GI3 561 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 CEP135Q66GS9 1140 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 MICALL1Q8N3F8 863 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 TMEM102Q8N9M5 508 aaPredicted RBP7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 NXPE3Q969Y0 559 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 C8orf37Q96NL8 207 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 PBX4Q9BYU1 374 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 PCDHGB7Q9Y5F8 929 aa7.78□□□□□ -1.16
ARHGAP28-209ENST00000579245 A0A096LPE4 126 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 A0A1W2PPZ6 126 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 PDE2AO00408 941 aaPredicted RBP7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 FBXO24O75426 580 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 USP48Q86UV5 1035 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 TGIF2Q9GZN2 237 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 ACBD3Q9H3P7 528 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 AVENQ9NQS1 362 aaPredicted RBP7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 MBIPQ9NS73 344 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 SLC6A14Q9UN76 642 aa7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
ARHGAP28-209ENST00000579245 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 ARAFP10398 606 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 XRCC5P13010 732 aaKnown RBP7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 ADH6P28332 368 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 ADH7P40394 386 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 PTPN12Q05209 780 aaKnown RBP7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 TPTE2Q6XPS3 522 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 PLD4Q96BZ4 506 aa7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 POP1Q99575 1024 aaKnown RBP7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 BHLHE41Q9C0J9 482 aaPredicted RBP7.76□□□□□ -1.17
ARHGAP28-209ENST00000579245 H3BM21 787 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 SMNDC1O75940 238 aaKnown RBP eCLIP7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 MAP2K3P46734 347 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 RACK1P63244 317 aaKnown RBP7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 CCDC85BQ15834 202 aaPredicted RBP7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 PERM1Q5SV97 790 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 FCHSD1Q86WN1 690 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 NPAS3Q8IXF0 933 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 SMG9Q9H0W8 520 aaKnown RBP7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 CAPN10Q9HC96 672 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 COPRSQ9NQ92 184 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
ARHGAP28-209ENST00000579245 IGF1RP08069 1367 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 F6X3S4 739 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 ITPKAP23677 461 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 TNNI2P48788 182 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 MAP3K11Q16584 847 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 ZNF787Q6DD87 383 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 ZNF654Q8IZM8 581 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 TRIM56Q9BRZ2 755 aaKnown RBP7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 MUC3BQ9H195 1237 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 ZFYVE1Q9HBF4 777 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 NAGPAQ9UK23 515 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 PPM1HQ9ULR3 514 aa7.74□□□□□ -1.17
ARHGAP28-209ENST00000579245 RELL1Q8IUW5 271 aa7.73□□□□□ -1.17
ARHGAP28-209ENST00000579245 NOC4LQ9BVI4 516 aaKnown RBP7.73□□□□□ -1.17
ARHGAP28-209ENST00000579245 LACRTQ9GZZ8 138 aa7.73□□□□□ -1.17
ARHGAP28-209ENST00000579245 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
ARHGAP28-209ENST00000579245 ELOA3CA0A087WX78 387 aaPredicted RBP7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ELOA3DA6NLF2 546 aaPredicted RBP7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ADARB2-AS1A8MUL3 147 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 MINDY4BA8MYZ0 360 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ALAS2P22557 587 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ZNF157P51786 506 aaPredicted RBP7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ELOA3BQ3SY89 546 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 RNFT1Q5M7Z0 435 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 PSAPL1Q6NUJ1 521 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ERMP1Q7Z2K6 904 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ELOA3Q8NG57 546 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 SLC16A10Q8TF71 515 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 NUDT8Q8WV74 236 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 ZNF576Q9H609 170 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 GPN3Q9UHW5 284 aaPredicted RBP7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 TRIM33Q9UPN9 1127 aa7.72□□□□□ -1.17
ARHGAP28-209ENST00000579245 TERTO14746 1132 aaKnown RBP7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 CELA3AP09093 270 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 MAP3K10Q02779 954 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 ADAMTSL4Q6UY14 1074 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 SV2BQ7L1I2 683 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 SREK1Q8WXA9 508 aaKnown RBP7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 CEP44Q9C0F1 390 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 SEC31BQ9NQW1 1179 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 INPP5FQ9Y2H2 1132 aa7.71□□□□□ -1.18
ARHGAP28-209ENST00000579245 PTPRAP18433 802 aa7.7□□□□□ -1.18
ARHGAP28-209ENST00000579245 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
ARHGAP28-209ENST00000579245 FAAP100Q0VG06 881 aa7.7□□□□□ -1.18
ARHGAP28-209ENST00000579245 GNL2Q13823 731 aaKnown RBP7.7□□□□□ -1.18
ARHGAP28-209ENST00000579245 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms