RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
CASC3-206ENST00000579238 WTIPA6NIX2 430 aaPredicted RBP11□□□□□ -0.65
CASC3-206ENST00000579238 UBE2Q2LH0YL09 131 aa11□□□□□ -0.65
CASC3-206ENST00000579238 MMP14P50281 582 aa11□□□□□ -0.65
CASC3-206ENST00000579238 CCT4P50991 539 aaKnown RBP11□□□□□ -0.65
CASC3-206ENST00000579238 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
CASC3-206ENST00000579238 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
CASC3-206ENST00000579238 NBPF9Q3BBW0 867 aa11□□□□□ -0.65
CASC3-206ENST00000579238 DACT2Q5SW24 774 aa11□□□□□ -0.65
CASC3-206ENST00000579238 STRIP1Q5VSL9 837 aa11□□□□□ -0.65
CASC3-206ENST00000579238 MOB2Q70IA6 237 aa11□□□□□ -0.65
CASC3-206ENST00000579238 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
CASC3-206ENST00000579238 COA1Q9GZY4 146 aa11□□□□□ -0.65
CASC3-206ENST00000579238 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
CASC3-206ENST00000579238 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 WNT10BO00744 389 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 NF2P35240 595 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 TM4SF4P48230 202 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 TTLL12Q14166 644 aaPredicted RBP10.99□□□□□ -0.65
CASC3-206ENST00000579238 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 TSPYL6Q8N831 410 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 HDAC9Q9UKV0 1011 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 LEMD3Q9Y2U8 911 aa10.99□□□□□ -0.65
CASC3-206ENST00000579238 H7C1W4 665 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 TBC1D8O95759 1140 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 IGHMBP2P38935 993 aaKnown RBP10.98□□□□□ -0.65
CASC3-206ENST00000579238 CWF19L2Q2TBE0 894 aaKnown RBP10.98□□□□□ -0.65
CASC3-206ENST00000579238 NOM1Q5C9Z4 860 aaKnown RBP10.98□□□□□ -0.65
CASC3-206ENST00000579238 ZNF296Q8WUU4 475 aaPredicted RBP10.98□□□□□ -0.65
CASC3-206ENST00000579238 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 HPS5Q9UPZ3 1129 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 PDE4DIPQ5VU43 2346 aa10.98□□□□□ -0.65
CASC3-206ENST00000579238 SREBF2Q12772 1141 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 ARMC9Q7Z3E5 817 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 UBE3BQ7Z3V4 1068 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
CASC3-206ENST00000579238 PLA2G12BQ9BX93 195 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
CASC3-206ENST00000579238 MYH3P11055 1940 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 GPR25O00155 361 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 SASH1O94885 1247 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 ITGA6P23229 1130 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
CASC3-206ENST00000579238 TSR2Q969E8 191 aaKnown RBP10.96□□□□□ -0.65
CASC3-206ENST00000579238 MPHOSPH8Q99549 860 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
CASC3-206ENST00000579238 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 TNRC18O15417 2968 aaPredicted RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 CSF1RP07333 972 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 KLRK1P26718 216 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 CASP7P55210 303 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 GTF2IP78347 998 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 GCKRQ14397 625 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 TWISTNBQ3B726 338 aaPredicted RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 LDLRAD1Q5T700 205 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 G2E3Q7L622 706 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 KIAA0825Q8IV33 1275 aa10.95□□□□□ -0.66
CASC3-206ENST00000579238 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
CASC3-206ENST00000579238 SPEF2Q9C093 1822 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 FKTNO75072 461 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 SLC4A2P04920 1241 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 KCNJ4P48050 445 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 PRKG1Q13976 671 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 CCDC27Q2M243 656 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 SPRYD7Q5W111 196 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
CASC3-206ENST00000579238 COL1A1P02452 1464 aaPredicted RBP10.93□□□□□ -0.66
CASC3-206ENST00000579238 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 CHRNDQ07001 517 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 FLIIQ13045 1269 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 DLGAP5Q15398 846 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 MAP3K11Q16584 847 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 WWC1Q8IX03 1113 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 DEFB129Q9H1M3 183 aa10.93□□□□□ -0.66
CASC3-206ENST00000579238 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
CASC3-206ENST00000579238 IL16Q14005 1332 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 ANKRD18BA2A2Z9 1011 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 MANSC4A6NHS7 340 aaPredicted RBP10.92□□□□□ -0.66
CASC3-206ENST00000579238 INHBEP58166 350 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 FKBP5Q13451 457 aaPredicted RBP10.92□□□□□ -0.66
CASC3-206ENST00000579238 C15orf52Q6ZUT6 534 aaKnown RBP10.92□□□□□ -0.66
CASC3-206ENST00000579238 LINS1Q8NG48 757 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 SLC10A4Q96EP9 437 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 R3HDMLQ9H3Y0 253 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
CASC3-206ENST00000579238 IRS2Q9Y4H2 1338 aa10.91□□□□□ -0.66
CASC3-206ENST00000579238 UNCXA6NJT0 531 aa10.91□□□□□ -0.66
CASC3-206ENST00000579238 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms