RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 XDHP47989 1333 aa11.35□□□□□ -0.59
BRIP1-204ENST00000579028 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
BRIP1-204ENST00000579028 NF2P35240 595 aa11.34□□□□□ -0.59
BRIP1-204ENST00000579028 TTLL12Q14166 644 aaPredicted RBP11.34□□□□□ -0.59
BRIP1-204ENST00000579028 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
BRIP1-204ENST00000579028 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 WNT10BO00744 389 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 ALDH1A1P00352 501 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
BRIP1-204ENST00000579028 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
BRIP1-204ENST00000579028 CCDC152Q4G0S7 254 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 LDLRAD1Q5T700 205 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
BRIP1-204ENST00000579028 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 HYPKQ9NX55 129 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 LAMB1P07942 1786 aa11.33□□□□□ -0.6
BRIP1-204ENST00000579028 MED23Q9ULK4 1368 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 PDE8AO60658 829 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 DACT2Q5SW24 774 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 OTOP1Q7RTM1 612 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 MYO3BQ8WXR4 1341 aa11.32□□□□□ -0.6
BRIP1-204ENST00000579028 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
BRIP1-204ENST00000579028 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
BRIP1-204ENST00000579028 MMP14P50281 582 aa11.31□□□□□ -0.6
BRIP1-204ENST00000579028 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
BRIP1-204ENST00000579028 INHBEP58166 350 aa11.31□□□□□ -0.6
BRIP1-204ENST00000579028 ANKRD18AQ8IVF6 992 aa11.31□□□□□ -0.6
BRIP1-204ENST00000579028 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
BRIP1-204ENST00000579028 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
BRIP1-204ENST00000579028 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
BRIP1-204ENST00000579028 RIC3Q7Z5B4 369 aa11.3□□□□□ -0.6
BRIP1-204ENST00000579028 IFNL1Q8IU54 200 aa11.3□□□□□ -0.6
BRIP1-204ENST00000579028 APOBEC3FQ8IUX4 373 aaKnown RBP11.3□□□□□ -0.6
BRIP1-204ENST00000579028 CCDC191Q8NCU4 936 aa11.3□□□□□ -0.6
BRIP1-204ENST00000579028 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
BRIP1-204ENST00000579028 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
BRIP1-204ENST00000579028 SASH1O94885 1247 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 PRKG1Q13976 671 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 ARMC5Q96C12 935 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
BRIP1-204ENST00000579028 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
BRIP1-204ENST00000579028 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 ANGEL1Q9UNK9 670 aaKnown RBP11.29□□□□□ -0.6
BRIP1-204ENST00000579028 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 PTPN22Q9Y2R2 807 aa11.29□□□□□ -0.6
BRIP1-204ENST00000579028 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
BRIP1-204ENST00000579028 IGF2BP3O00425 579 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRIP1-204ENST00000579028 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
BRIP1-204ENST00000579028 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
BRIP1-204ENST00000579028 CCDC85AQ96PX6 553 aaPredicted RBP11.28□□□□□ -0.6
BRIP1-204ENST00000579028 MYD88Q99836 296 aa11.28□□□□□ -0.6
BRIP1-204ENST00000579028 BSDC1Q9NW68 430 aaPredicted RBP11.28□□□□□ -0.6
BRIP1-204ENST00000579028 CWC25Q9NXE8 425 aaPredicted RBP11.28□□□□□ -0.6
BRIP1-204ENST00000579028 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
BRIP1-204ENST00000579028 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 CCT4P50991 539 aaKnown RBP11.27□□□□□ -0.61
BRIP1-204ENST00000579028 CTSWP56202 376 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 NEUROD2Q15784 382 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
BRIP1-204ENST00000579028 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
BRIP1-204ENST00000579028 SPEF2Q9C093 1822 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 SSC5DA1L4H1 1573 aa11.27□□□□□ -0.61
BRIP1-204ENST00000579028 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
BRIP1-204ENST00000579028 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 TXNRD3Q86VQ6 643 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 METTL22Q9BUU2 404 aaPredicted RBP11.26□□□□□ -0.61
BRIP1-204ENST00000579028 FZD1Q9UP38 647 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 MYH3P11055 1940 aa11.26□□□□□ -0.61
BRIP1-204ENST00000579028 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 CRHR2Q13324 411 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 CCDC146Q8IYE0 955 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 DEFB129Q9H1M3 183 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 MBIPQ9NS73 344 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 PPP2R3BQ9Y5P8 575 aa11.25□□□□□ -0.61
BRIP1-204ENST00000579028 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
BRIP1-204ENST00000579028 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 PPP1R12BO60237 982 aaPredicted RBP11.24□□□□□ -0.61
BRIP1-204ENST00000579028 SP3Q02447 781 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 MTMR14Q8NCE2 650 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
BRIP1-204ENST00000579028 ZNF333Q96JL9 665 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms