RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 SCN4AP35499 1836 aa19■□□□□ 0.63
SLC6A4-204ENST00000578609 RAD17O75943 681 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 VEGFAP15692 232 aaPredicted RBP18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 IL15P40933 162 aaPredicted RBP18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 ATP8B2P98198 1209 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 TNIP1Q15025 636 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 CEP85Q6P2H3 762 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 PODNQ7Z5L7 613 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 SSH3Q8TE77 659 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 SIL1Q9H173 461 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 RRAGCQ9HB90 399 aa18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 ZNF646O15015 1829 aaPredicted RBP18.99■□□□□ 0.63
SLC6A4-204ENST00000578609 IQCA1LA6NCM1 817 aa18.98■□□□□ 0.63
SLC6A4-204ENST00000578609 GJA3Q9Y6H8 435 aa18.98■□□□□ 0.63
SLC6A4-204ENST00000578609 G3V3G9 751 aa18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 FGFR2P21802 821 aa18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 SCNN1DP51172 638 aa18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 KCNQ5Q9NR82 932 aa18.97■□□□□ 0.63
SLC6A4-204ENST00000578609 PSMD14O00487 310 aa18.96■□□□□ 0.63
SLC6A4-204ENST00000578609 ZNF804AQ7Z570 1209 aa18.96■□□□□ 0.63
SLC6A4-204ENST00000578609 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
SLC6A4-204ENST00000578609 GMPSP49915 693 aaPredicted RBP18.95■□□□□ 0.62
SLC6A4-204ENST00000578609 CD209Q9NNX6 404 aa18.95■□□□□ 0.62
SLC6A4-204ENST00000578609 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
SLC6A4-204ENST00000578609 ADAMTSL1Q8N6G6 1762 aa18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 VIL1P09327 827 aaKnown RBP18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 IL1R1P14778 569 aa18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 RPS12P25398 132 aaKnown RBP18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 TAF1DQ9H5J8 278 aaPredicted RBP18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 GPRC5DQ9NZD1 345 aa18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
SLC6A4-204ENST00000578609 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 IFIT1P09914 478 aaKnown RBP18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 LMOD1P29536 600 aaPredicted RBP18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 RPAP2Q8IXW5 612 aaPredicted RBP18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 LPIN2Q92539 896 aa18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 DPF2Q92785 391 aa18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 FAM84BQ96KN1 310 aaPredicted RBP18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
SLC6A4-204ENST00000578609 TOMM70O94826 608 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 SLC5A1P13866 664 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 EPHX2P34913 555 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 GYG1P46976 350 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 ATP2B3Q16720 1220 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 DACT2Q5SW24 774 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 STRIP1Q5VSL9 837 aa18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 RSBN1LQ6PCB5 846 aaPredicted RBP18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 ZBTB12Q9Y330 459 aaPredicted RBP18.92■□□□□ 0.62
SLC6A4-204ENST00000578609 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 FBXO33Q7Z6M2 555 aa18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 SIRT2Q8IXJ6 389 aa18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 AGBL3Q8NEM8 1001 aa18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 RBM46Q8TBY0 533 aaKnown RBP18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 GMLQ99445 158 aa18.91■□□□□ 0.62
SLC6A4-204ENST00000578609 EPS15P42566 896 aa18.9■□□□□ 0.62
SLC6A4-204ENST00000578609 TFCP2Q12800 502 aa18.9■□□□□ 0.62
SLC6A4-204ENST00000578609 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
SLC6A4-204ENST00000578609 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SLC6A4-204ENST00000578609 MYO3BQ8WXR4 1341 aa18.9■□□□□ 0.62
SLC6A4-204ENST00000578609 HMMRO75330 724 aa18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 SURF6O75683 361 aaKnown RBP18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 SASH1O94885 1247 aa18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 PNMA8AQ86V59 439 aaPredicted RBP18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 MICALL2Q8IY33 904 aa18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 ADARB2Q9NS39 739 aaKnown RBP18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 FAM205AQ6ZU69 1335 aa18.89■□□□□ 0.61
SLC6A4-204ENST00000578609 GTF2IP78347 998 aa18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 TTLL5Q6EMB2 1281 aa18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 CRBNQ96SW2 442 aa18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 CNOT7Q9UIV1 285 aaKnown RBP18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 AKAP2Q9Y2D5 859 aa18.88■□□□□ 0.61
SLC6A4-204ENST00000578609 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 SHTN1A0MZ66 631 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 ZBTB22O15209 634 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 POTEIP0CG38 1075 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 POTEJP0CG39 1038 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 BCAMP50895 628 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 ZNF280AP59817 542 aaPredicted RBP18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 C1QTNF8P60827 252 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 FKBP1AP62942 108 aaKnown RBP18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 LDHDQ86WU2 507 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 VPS37DQ86XT2 251 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
SLC6A4-204ENST00000578609 COL1A1P02452 1464 aaPredicted RBP18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 FSTL1Q12841 308 aa18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 OS9Q13438 667 aaPredicted RBP18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 FBXW7Q969H0 707 aa18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 MXD3Q9BW11 206 aa18.86■□□□□ 0.61
SLC6A4-204ENST00000578609 H7C1D1 291 aa18.85■□□□□ 0.61
SLC6A4-204ENST00000578609 ADORA1P30542 326 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms