RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
LINC01543-201ENST00000578367 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
LINC01543-201ENST00000578367 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
LINC01543-201ENST00000578367 DUOX1Q9NRD9 1551 aa17.04■□□□□ 0.32
LINC01543-201ENST00000578367 SEMA3EO15041 775 aa17.04■□□□□ 0.32
LINC01543-201ENST00000578367 HIBADHP31937 336 aaKnown RBP17.04■□□□□ 0.32
LINC01543-201ENST00000578367 ZNF512BQ96KM6 892 aaPredicted RBP17.04■□□□□ 0.32
LINC01543-201ENST00000578367 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
LINC01543-201ENST00000578367 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
LINC01543-201ENST00000578367 ZNF609O15014 1411 aa17.04■□□□□ 0.32
LINC01543-201ENST00000578367 TAF1P21675 1872 aa17.03■□□□□ 0.32
LINC01543-201ENST00000578367 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
LINC01543-201ENST00000578367 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
LINC01543-201ENST00000578367 NUCB1Q02818 461 aa17.03■□□□□ 0.32
LINC01543-201ENST00000578367 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
LINC01543-201ENST00000578367 NIM1KQ8IY84 436 aa17.03■□□□□ 0.32
LINC01543-201ENST00000578367 EAF2Q96CJ1 260 aaPredicted RBP17.03■□□□□ 0.32
LINC01543-201ENST00000578367 FAM84BQ96KN1 310 aaPredicted RBP17.03■□□□□ 0.32
LINC01543-201ENST00000578367 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 G3V3G9 751 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 IL1R1P14778 569 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 TIMM10P62072 90 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 RASSF7Q02833 373 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 AOC3Q16853 763 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 DCAF8Q5TAQ9 597 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 SLC51AQ86UW1 340 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 AACSQ86V21 672 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 NEUROD6Q96NK8 337 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
LINC01543-201ENST00000578367 PDS5AQ29RF7 1337 aaKnown RBP17.01■□□□□ 0.31
LINC01543-201ENST00000578367 IGSF3O75054 1194 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 UQCRFS1P1P0C7P4 283 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
LINC01543-201ENST00000578367 FZD9O00144 591 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 SNAP23O00161 211 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 APBB1O00213 710 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 RIMBP2O15034 1052 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 CCDC102BQ68D86 513 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
LINC01543-201ENST00000578367 TDRD7Q8NHU6 1098 aaKnown RBP17■□□□□ 0.31
LINC01543-201ENST00000578367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
LINC01543-201ENST00000578367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
LINC01543-201ENST00000578367 WTIPA6NIX2 430 aaPredicted RBP16.99■□□□□ 0.31
LINC01543-201ENST00000578367 ECE2O60344 883 aa16.99■□□□□ 0.31
LINC01543-201ENST00000578367 KLRK1P26718 216 aa16.99■□□□□ 0.31
LINC01543-201ENST00000578367 ARID4AP29374 1257 aaPredicted RBP16.99■□□□□ 0.31
LINC01543-201ENST00000578367 MMP14P50281 582 aa16.99■□□□□ 0.31
LINC01543-201ENST00000578367 PRELPP51888 382 aa16.99■□□□□ 0.31
LINC01543-201ENST00000578367 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
LINC01543-201ENST00000578367 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
LINC01543-201ENST00000578367 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 GYG1P46976 350 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 BCAMP50895 628 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 EIF6P56537 245 aaKnown RBP16.98■□□□□ 0.31
LINC01543-201ENST00000578367 FKBP1AP62942 108 aaKnown RBP16.98■□□□□ 0.31
LINC01543-201ENST00000578367 TNIP1Q15025 636 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
LINC01543-201ENST00000578367 DBNDD2Q9BQY9 259 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
LINC01543-201ENST00000578367 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
LINC01543-201ENST00000578367 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
LINC01543-201ENST00000578367 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
LINC01543-201ENST00000578367 ADORA1P30542 326 aa16.97■□□□□ 0.31
LINC01543-201ENST00000578367 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
LINC01543-201ENST00000578367 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
LINC01543-201ENST00000578367 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
LINC01543-201ENST00000578367 AOX1Q06278 1338 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 SPEF2Q9C093 1822 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 ERC2O15083 957 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 ATP5JP18859 108 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 PHKA1P46020 1223 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 SUGT1Q9Y2Z0 365 aa16.96■□□□□ 0.31
LINC01543-201ENST00000578367 GOLGB1Q14789 3259 aaKnown RBP16.96■□□□□ 0.31
LINC01543-201ENST00000578367 USP17L3A6NCW0 530 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 USP17L4A6NCW7 530 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
LINC01543-201ENST00000578367 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
LINC01543-201ENST00000578367 RPS12P25398 132 aaKnown RBP16.95■□□□□ 0.3
LINC01543-201ENST00000578367 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 DPY19L2Q6NUT2 758 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
LINC01543-201ENST00000578367 USP17L1Q7RTZ2 530 aa16.95■□□□□ 0.3
LINC01543-201ENST00000578367 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
LINC01543-201ENST00000578367 OSBPL3Q9H4L5 887 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms