RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 CTSWP56202 376 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 PRKG1Q13976 671 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 GREM2Q9H772 168 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 IFT57Q9NWB7 429 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 MINPP1Q9UNW1 487 aa17.55■□□□□ 0.4
UPF3AP2-202ENST00000578315 WNT10BO00744 389 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 SASH1O94885 1247 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 GNAI1P63096 354 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 DACT2Q5SW24 774 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 OGFOD1Q8N543 542 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 TTLL11Q8NHH1 800 aa17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.54■□□□□ 0.4
UPF3AP2-202ENST00000578315 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
UPF3AP2-202ENST00000578315 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
UPF3AP2-202ENST00000578315 CCT4P50991 539 aaKnown RBP17.53■□□□□ 0.4
UPF3AP2-202ENST00000578315 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
UPF3AP2-202ENST00000578315 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
UPF3AP2-202ENST00000578315 GPR25O00155 361 aa17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 NF2P35240 595 aa17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 TM4SF4P48230 202 aa17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 PKN2Q16513 984 aaKnown RBP17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
UPF3AP2-202ENST00000578315 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 TSPYL6Q8N831 410 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 R3HDMLQ9H3Y0 253 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 ZNF646O15015 1829 aaPredicted RBP17.51■□□□□ 0.39
UPF3AP2-202ENST00000578315 KLRK1P26718 216 aa17.5■□□□□ 0.39
UPF3AP2-202ENST00000578315 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
UPF3AP2-202ENST00000578315 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
UPF3AP2-202ENST00000578315 KIAA0825Q8IV33 1275 aa17.5■□□□□ 0.39
UPF3AP2-202ENST00000578315 COA1Q9GZY4 146 aa17.5■□□□□ 0.39
UPF3AP2-202ENST00000578315 MYO3BQ8WXR4 1341 aa17.49■□□□□ 0.39
UPF3AP2-202ENST00000578315 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
UPF3AP2-202ENST00000578315 ARMC9Q7Z3E5 817 aa17.49■□□□□ 0.39
UPF3AP2-202ENST00000578315 FKTNO75072 461 aa17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 NEXNQ0ZGT2 675 aa17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 SREBF2Q12772 1141 aa17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 FBXO46Q6PJ61 603 aaPredicted RBP17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 ANGEL1Q9UNK9 670 aaKnown RBP17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 MYH3P11055 1940 aa17.48■□□□□ 0.39
UPF3AP2-202ENST00000578315 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
UPF3AP2-202ENST00000578315 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
UPF3AP2-202ENST00000578315 GTF2IP78347 998 aa17.47■□□□□ 0.39
UPF3AP2-202ENST00000578315 LEMD3Q9Y2U8 911 aa17.47■□□□□ 0.39
UPF3AP2-202ENST00000578315 SPRYD7Q5W111 196 aa17.46■□□□□ 0.39
UPF3AP2-202ENST00000578315 G2E3Q7L622 706 aa17.46■□□□□ 0.39
UPF3AP2-202ENST00000578315 APOBEC3FQ8IUX4 373 aaKnown RBP17.46■□□□□ 0.39
UPF3AP2-202ENST00000578315 TSR2Q969E8 191 aaKnown RBP17.46■□□□□ 0.39
UPF3AP2-202ENST00000578315 H7C1W4 665 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 ITGA6P23229 1130 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 KCNJ4P48050 445 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 MPHOSPH8Q99549 860 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
UPF3AP2-202ENST00000578315 SNAP23O00161 211 aa17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 SLC10A4Q96EP9 437 aa17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 ZBED3Q96IU2 234 aaPredicted RBP17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 ANKRD2Q9GZV1 360 aa17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
UPF3AP2-202ENST00000578315 F8W031 263 aaPredicted RBP17.43■□□□□ 0.38
UPF3AP2-202ENST00000578315 CHRNDQ07001 517 aa17.43■□□□□ 0.38
UPF3AP2-202ENST00000578315 DLGAP5Q15398 846 aa17.43■□□□□ 0.38
UPF3AP2-202ENST00000578315 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
UPF3AP2-202ENST00000578315 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
UPF3AP2-202ENST00000578315 TAF5LO75529 589 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 MMP14P50281 582 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 GCKRQ14397 625 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 CERS5Q8N5B7 392 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 CFHR5Q9BXR6 569 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 TRIM17Q9Y577 477 aa17.42■□□□□ 0.38
UPF3AP2-202ENST00000578315 CLRN2A0PK11 232 aa17.41■□□□□ 0.38
UPF3AP2-202ENST00000578315 ALDH1A1P00352 501 aa17.41■□□□□ 0.38
UPF3AP2-202ENST00000578315 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
UPF3AP2-202ENST00000578315 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
UPF3AP2-202ENST00000578315 MANSC4A6NHS7 340 aaPredicted RBP17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 WNK4Q96J92 1243 aa17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 PLA2G12BQ9BX93 195 aa17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 JAG2Q9Y219 1238 aa17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
UPF3AP2-202ENST00000578315 PPP1R12BO60237 982 aaPredicted RBP17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 CSF1RP07333 972 aa17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 CASP7P55210 303 aa17.39■□□□□ 0.37
UPF3AP2-202ENST00000578315 CFAP100Q494V2 611 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms