RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MTX1Q13505 466 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 UBE4AQ14139 1066 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 LDHDQ86WU2 507 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 ITPRIPQ8IWB1 547 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 DPF2Q92785 391 aa28.85■■■□□ 2.21
LIMD2-204ENST00000578297 RPS12P25398 132 aaKnown RBP28.84■■■□□ 2.21
LIMD2-204ENST00000578297 EAPPQ56P03 285 aaPredicted RBP28.84■■■□□ 2.21
LIMD2-204ENST00000578297 YTHDC1Q96MU7 727 aaKnown RBP28.84■■■□□ 2.21
LIMD2-204ENST00000578297 FBXO3Q9UK99 471 aa28.84■■■□□ 2.21
LIMD2-204ENST00000578297 ZBTB12Q9Y330 459 aaPredicted RBP28.84■■■□□ 2.21
LIMD2-204ENST00000578297 PSME4Q14997 1843 aa28.84■■■□□ 2.21
LIMD2-204ENST00000578297 EYA2O00167 538 aa28.83■■■□□ 2.21
LIMD2-204ENST00000578297 METTL24Q5JXM2 366 aa28.83■■■□□ 2.21
LIMD2-204ENST00000578297 CHADLQ6NUI6 762 aa28.83■■■□□ 2.21
LIMD2-204ENST00000578297 ADARB2Q9NS39 739 aaKnown RBP28.83■■■□□ 2.21
LIMD2-204ENST00000578297 USP17L3A6NCW0 530 aa28.82■■■□□ 2.2
LIMD2-204ENST00000578297 USP17L4A6NCW7 530 aa28.82■■■□□ 2.2
LIMD2-204ENST00000578297 ZBTB7BO15156 539 aaPredicted RBP28.82■■■□□ 2.2
LIMD2-204ENST00000578297 USP50Q70EL3 339 aaPredicted RBP28.82■■■□□ 2.2
LIMD2-204ENST00000578297 USP17L1Q7RTZ2 530 aa28.82■■■□□ 2.2
LIMD2-204ENST00000578297 VGLL2Q8N8G2 317 aa28.82■■■□□ 2.2
LIMD2-204ENST00000578297 CNOT7Q9UIV1 285 aaKnown RBP28.82■■■□□ 2.2
LIMD2-204ENST00000578297 ADAMTSL1Q8N6G6 1762 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 PDE8BO95263 885 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 HSPA6P17066 643 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 PANK1Q8TE04 598 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 CD209Q9NNX6 404 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 COPRSQ9NQ92 184 aa28.81■■■□□ 2.2
LIMD2-204ENST00000578297 ZNF609O15014 1411 aa28.8■■■□□ 2.2
LIMD2-204ENST00000578297 SRGAP3O43295 1099 aa28.8■■■□□ 2.2
LIMD2-204ENST00000578297 CIAO1O76071 339 aa28.8■■■□□ 2.2
LIMD2-204ENST00000578297 RSBN1LQ6PCB5 846 aaPredicted RBP28.8■■■□□ 2.2
LIMD2-204ENST00000578297 ATG9AQ7Z3C6 839 aa28.8■■■□□ 2.2
LIMD2-204ENST00000578297 H7C1D1 291 aa28.79■■■□□ 2.2
LIMD2-204ENST00000578297 STRIP1Q5VSL9 837 aa28.79■■■□□ 2.2
LIMD2-204ENST00000578297 ZNF804AQ7Z570 1209 aa28.79■■■□□ 2.2
LIMD2-204ENST00000578297 MICALL2Q8IY33 904 aa28.79■■■□□ 2.2
LIMD2-204ENST00000578297 AGBL3Q8NEM8 1001 aa28.79■■■□□ 2.2
LIMD2-204ENST00000578297 CLEC11AQ9Y240 323 aa28.78■■■□□ 2.2
LIMD2-204ENST00000578297 IL1R1P14778 569 aa28.77■■■□□ 2.2
LIMD2-204ENST00000578297 DACT2Q5SW24 774 aa28.77■■■□□ 2.2
LIMD2-204ENST00000578297 GMLQ99445 158 aa28.77■■■□□ 2.2
LIMD2-204ENST00000578297 SIL1Q9H173 461 aa28.77■■■□□ 2.2
LIMD2-204ENST00000578297 PA2G4Q9UQ80 394 aaKnown RBP28.77■■■□□ 2.2
LIMD2-204ENST00000578297 SHTN1A0MZ66 631 aa28.76■■■□□ 2.19
LIMD2-204ENST00000578297 TTLL5Q6EMB2 1281 aa28.76■■■□□ 2.19
LIMD2-204ENST00000578297 IL15P40933 162 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-204ENST00000578297 PUM3Q15397 648 aaKnown RBP28.75■■■□□ 2.19
LIMD2-204ENST00000578297 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-204ENST00000578297 ZNF646O15015 1829 aaPredicted RBP28.75■■■□□ 2.19
LIMD2-204ENST00000578297 PNMA6EA0A0J9YXQ4 647 aa28.74■■■□□ 2.19
LIMD2-204ENST00000578297 FGFR2P21802 821 aa28.74■■■□□ 2.19
LIMD2-204ENST00000578297 MVPQ14764 893 aaKnown RBP28.74■■■□□ 2.19
LIMD2-204ENST00000578297 FAM84BQ96KN1 310 aaPredicted RBP28.74■■■□□ 2.19
LIMD2-204ENST00000578297 MYO3BQ8WXR4 1341 aa28.73■■■□□ 2.19
LIMD2-204ENST00000578297 HIBADHP31937 336 aaKnown RBP28.73■■■□□ 2.19
LIMD2-204ENST00000578297 GTF2IP78347 998 aa28.73■■■□□ 2.19
LIMD2-204ENST00000578297 FBXW7Q969H0 707 aa28.73■■■□□ 2.19
LIMD2-204ENST00000578297 CEP126Q9P2H0 1117 aa28.73■■■□□ 2.19
LIMD2-204ENST00000578297 GYG1P46976 350 aa28.72■■■□□ 2.19
LIMD2-204ENST00000578297 HIRAP54198 1017 aaPredicted RBP28.72■■■□□ 2.19
LIMD2-204ENST00000578297 ATP8B2P98198 1209 aa28.72■■■□□ 2.19
LIMD2-204ENST00000578297 TRPM4Q8TD43 1214 aa28.72■■■□□ 2.19
LIMD2-204ENST00000578297 IFIT1P09914 478 aaKnown RBP28.71■■■□□ 2.19
LIMD2-204ENST00000578297 APLP1P51693 650 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 ZNF280AP59817 542 aaPredicted RBP28.71■■■□□ 2.19
LIMD2-204ENST00000578297 PDE3AQ14432 1141 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 MAP1SQ66K74 1059 aaPredicted RBP28.71■■■□□ 2.19
LIMD2-204ENST00000578297 SAMD7Q7Z3H4 446 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 FBXO33Q7Z6M2 555 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 CNTROBQ8N137 903 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 ZC3H15Q8WU90 426 aaKnown RBP28.71■■■□□ 2.19
LIMD2-204ENST00000578297 LPIN2Q92539 896 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 C1orf115Q9H7X2 142 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 PGAP2Q9UHJ9 254 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 COG6Q9Y2V7 657 aa28.71■■■□□ 2.19
LIMD2-204ENST00000578297 SASH1O94885 1247 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 ITGBL1O95965 494 aaPredicted RBP28.7■■■□□ 2.18
LIMD2-204ENST00000578297 USP17L8P0C7I0 530 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 POLA2Q14181 598 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 CAVIN4Q5BKX8 364 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 TDRD7Q8NHU6 1098 aaKnown RBP28.7■■■□□ 2.18
LIMD2-204ENST00000578297 MXD3Q9BW11 206 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 DDX19BQ9UMR2 479 aa28.7■■■□□ 2.18
LIMD2-204ENST00000578297 SLC5A1P13866 664 aa28.69■■■□□ 2.18
LIMD2-204ENST00000578297 TBC1D10BQ4KMP7 808 aaPredicted RBP28.69■■■□□ 2.18
LIMD2-204ENST00000578297 SSH3Q8TE77 659 aa28.69■■■□□ 2.18
LIMD2-204ENST00000578297 EGFRP00533 1210 aa28.68■■■□□ 2.18
LIMD2-204ENST00000578297 MMP14P50281 582 aa28.68■■■□□ 2.18
LIMD2-204ENST00000578297 VPS37DQ86XT2 251 aa28.68■■■□□ 2.18
LIMD2-204ENST00000578297 PASKQ96RG2 1323 aa28.68■■■□□ 2.18
LIMD2-204ENST00000578297 FKBP1AP62942 108 aaKnown RBP28.67■■■□□ 2.18
LIMD2-204ENST00000578297 FAM205AQ6ZU69 1335 aa28.67■■■□□ 2.18
LIMD2-204ENST00000578297 ATP2B3Q16720 1220 aa28.66■■■□□ 2.18
LIMD2-204ENST00000578297 KIF4BQ2VIQ3 1234 aa28.66■■■□□ 2.18
LIMD2-204ENST00000578297 RBM26Q5T8P6 1007 aaKnown RBP28.66■■■□□ 2.18
LIMD2-204ENST00000578297 C20orf194Q5TEA3 1177 aa28.66■■■□□ 2.18
LIMD2-204ENST00000578297 CHMP4BQ9H444 224 aaKnown RBP28.66■■■□□ 2.18
LIMD2-204ENST00000578297 BCAMP50895 628 aa28.65■■■□□ 2.18
LIMD2-204ENST00000578297 OGFOD1Q8N543 542 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms