RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 STRIP1Q5VSL9 837 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 ZIC5Q96T25 663 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 GMLQ99445 158 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 MPHOSPH8Q99549 860 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 KCNJ4P48050 445 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 RASAL3Q86YV0 1011 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 GREM2Q9H772 168 aa18.16■□□□□ 0.5
SMARCD2-205ENST00000577686 ASTN2O75129 1339 aaPredicted RBP18.15■□□□□ 0.5
SMARCD2-205ENST00000577686 IL16Q14005 1332 aa18.15■□□□□ 0.5
SMARCD2-205ENST00000577686 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
SMARCD2-205ENST00000577686 CTU1Q7Z7A3 348 aaKnown RBP18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 TSPYL6Q8N831 410 aa18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 CSRNP1Q96S65 589 aa18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 PSME4Q14997 1843 aa18.14■□□□□ 0.49
SMARCD2-205ENST00000577686 H7C1W4 665 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 CWF19L2Q2TBE0 894 aaKnown RBP18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 NCBP3Q53F19 620 aaKnown RBP18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 DACT2Q5SW24 774 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 ARMC9Q7Z3E5 817 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 PLA2G12BQ9BX93 195 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 ZNF804BA4D1E1 1349 aa18.13■□□□□ 0.49
SMARCD2-205ENST00000577686 ITGA6P23229 1130 aa18.12■□□□□ 0.49
SMARCD2-205ENST00000577686 SREBF2Q12772 1141 aa18.12■□□□□ 0.49
SMARCD2-205ENST00000577686 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
SMARCD2-205ENST00000577686 PKN2Q16513 984 aaKnown RBP18.12■□□□□ 0.49
SMARCD2-205ENST00000577686 CASP8AP2Q9UKL3 1982 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 FLIIQ13045 1269 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 GCKRQ14397 625 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 LINS1Q8NG48 757 aa18.11■□□□□ 0.49
SMARCD2-205ENST00000577686 MYH3P11055 1940 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 COL1A1P02452 1464 aaPredicted RBP18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 ANKRD18BA2A2Z9 1011 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 WNT10BO00744 389 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 NBPF9Q3BBW0 867 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 DNAAF4Q8WXU2 420 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 AKAP11Q9UKA4 1901 aa18.1■□□□□ 0.49
SMARCD2-205ENST00000577686 POLR2AP24928 1970 aaKnown RBP18.08■□□□□ 0.49
SMARCD2-205ENST00000577686 UBE2Q2LH0YL09 131 aa18.08■□□□□ 0.48
SMARCD2-205ENST00000577686 MYO1BO43795 1136 aa18.08■□□□□ 0.48
SMARCD2-205ENST00000577686 ZNF804AQ7Z570 1209 aa18.08■□□□□ 0.48
SMARCD2-205ENST00000577686 SASH1O94885 1247 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 SLC34A2O95436 690 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 CSF1RP07333 972 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 GTF2IP78347 998 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 CHRNDQ07001 517 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 DLGAP5Q15398 846 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 KIAA0825Q8IV33 1275 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 CHMP3Q9Y3E7 222 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 PPP2R3BQ9Y5P8 575 aa18.07■□□□□ 0.48
SMARCD2-205ENST00000577686 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
SMARCD2-205ENST00000577686 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
SMARCD2-205ENST00000577686 G2E3Q7L622 706 aa18.06■□□□□ 0.48
SMARCD2-205ENST00000577686 MXD3Q9BW11 206 aa18.06■□□□□ 0.48
SMARCD2-205ENST00000577686 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 TM4SF4P48230 202 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 MOB2Q70IA6 237 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 WDR63Q8IWG1 891 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 CD209Q9NNX6 404 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 SPEF2Q9C093 1822 aa18.05■□□□□ 0.48
SMARCD2-205ENST00000577686 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
SMARCD2-205ENST00000577686 SOX10P56693 466 aa18.04■□□□□ 0.48
SMARCD2-205ENST00000577686 PRAMEF18Q5VWM3 479 aa18.04■□□□□ 0.48
SMARCD2-205ENST00000577686 C15orf52Q6ZUT6 534 aaKnown RBP18.04■□□□□ 0.48
SMARCD2-205ENST00000577686 TXNRD3Q86VQ6 643 aa18.04■□□□□ 0.48
SMARCD2-205ENST00000577686 UNCXA6NJT0 531 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 CASP7P55210 303 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 INHBEP58166 350 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 FKBP1AP62942 108 aaKnown RBP18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 CCDC57Q2TAC2 916 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 SUPT20HL1Q3ZLR7 823 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 ANGEL1Q9UNK9 670 aaKnown RBP18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 SCAF8Q9UPN6 1271 aaKnown RBP18.03■□□□□ 0.48
SMARCD2-205ENST00000577686 MANSC4A6NHS7 340 aaPredicted RBP18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 WTIPA6NIX2 430 aaPredicted RBP18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 GPR25O00155 361 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 TBC1D8O95759 1140 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 MTMR14Q8NCE2 650 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 SLC10A4Q96EP9 437 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 HPS5Q9UPZ3 1129 aa18.02■□□□□ 0.48
SMARCD2-205ENST00000577686 ANP32CO43423 234 aa18.01■□□□□ 0.47
SMARCD2-205ENST00000577686 FKTNO75072 461 aa18.01■□□□□ 0.47
SMARCD2-205ENST00000577686 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
SMARCD2-205ENST00000577686 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
SMARCD2-205ENST00000577686 PRKG1Q13976 671 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms