RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 KLRK1P26718 216 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRPF8-213ENST00000576407 AACSQ86V21 672 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 CHD1LQ86WJ1 897 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 NEUROD6Q96NK8 337 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
PRPF8-213ENST00000576407 PSMD1Q99460 953 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 LNPKQ9C0E8 428 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 CCDC8Q9H0W5 538 aaPredicted RBP10.5□□□□□ -0.73
PRPF8-213ENST00000576407 FER1L6Q2WGJ9 1857 aa10.5□□□□□ -0.73
PRPF8-213ENST00000576407 NFKBIEO00221 500 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 IFIT2P09913 472 aaKnown RBP10.49□□□□□ -0.73
PRPF8-213ENST00000576407 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
PRPF8-213ENST00000576407 ADORA1P30542 326 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 GPR162Q16538 588 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 ARHGAP27Q6ZUM4 889 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 TXNRD3Q86VQ6 643 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 C16orf71Q8IYS4 520 aaPredicted RBP10.49□□□□□ -0.73
PRPF8-213ENST00000576407 SUPT20HQ8NEM7 779 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 XAGE2Q96GT9 111 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 EYA3Q99504 573 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 TLR7Q9NYK1 1049 aaKnown RBP10.49□□□□□ -0.73
PRPF8-213ENST00000576407 DBNLQ9UJU6 430 aaKnown RBP10.49□□□□□ -0.73
PRPF8-213ENST00000576407 IRS2Q9Y4H2 1338 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 ARAP2Q8WZ64 1704 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 MED23Q9ULK4 1368 aa10.49□□□□□ -0.73
PRPF8-213ENST00000576407 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
PRPF8-213ENST00000576407 GYG1P46976 350 aa10.48□□□□□ -0.73
PRPF8-213ENST00000576407 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
PRPF8-213ENST00000576407 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
PRPF8-213ENST00000576407 OTUD7AQ8TE49 926 aaPredicted RBP10.48□□□□□ -0.73
PRPF8-213ENST00000576407 FAM84BQ96KN1 310 aaPredicted RBP10.48□□□□□ -0.73
PRPF8-213ENST00000576407 DBNDD2Q9BQY9 259 aa10.48□□□□□ -0.73
PRPF8-213ENST00000576407 ZC3H12CQ9C0D7 883 aaKnown RBP10.48□□□□□ -0.73
PRPF8-213ENST00000576407 ZNF277Q9NRM2 450 aaPredicted RBP10.48□□□□□ -0.73
PRPF8-213ENST00000576407 LTBP3Q9NS15 1303 aa10.48□□□□□ -0.73
PRPF8-213ENST00000576407 YY1P25490 414 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 BCAMP50895 628 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 RASSF7Q02833 373 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 KIAA2012Q0VF49 1180 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 AOC3Q16853 763 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
PRPF8-213ENST00000576407 PPIP5K2O43314 1243 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 GRIN3BO60391 1043 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 PDE4AP27815 886 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.73
PRPF8-213ENST00000576407 IARSP41252 1262 aaKnown RBP10.46□□□□□ -0.73
PRPF8-213ENST00000576407 PHKA1P46020 1223 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 PRELPP51888 382 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 CCDC102BQ68D86 513 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 ZNF804AQ7Z570 1209 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 FBXO33Q7Z6M2 555 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 VPS37DQ86XT2 251 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 VPS33BQ9H267 617 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 SALL3Q9BXA9 1300 aa10.46□□□□□ -0.73
PRPF8-213ENST00000576407 COL4A5P29400 1685 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 G3V3G9 751 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 MX1P20591 662 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 DOK7Q18PE1 504 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 CCDC158Q5M9N0 1113 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 SKAP1Q86WV1 359 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 LARGE2Q8N3Y3 721 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 COA1Q9GZY4 146 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 DBNDD1Q9H9R9 158 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 CD209Q9NNX6 404 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 ECHDC1Q9NTX5 307 aa10.45□□□□□ -0.74
PRPF8-213ENST00000576407 TTC41PQ6P2S7 1318 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 IL1R1P14778 569 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 LMNB1P20700 586 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 ARID4AP29374 1257 aaPredicted RBP10.44□□□□□ -0.74
PRPF8-213ENST00000576407 PDE1AP54750 535 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 TTC39AQ5SRH9 613 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 TSHZ3Q63HK5 1081 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 PLEKHM2Q8IWE5 1019 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 TDRD7Q8NHU6 1098 aaKnown RBP10.44□□□□□ -0.74
PRPF8-213ENST00000576407 GPATCH3Q96I76 525 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 ZNF512BQ96KM6 892 aaPredicted RBP10.44□□□□□ -0.74
PRPF8-213ENST00000576407 GNL3LQ9NVN8 582 aaKnown RBP10.44□□□□□ -0.74
PRPF8-213ENST00000576407 STAP2Q9UGK3 403 aa10.44□□□□□ -0.74
PRPF8-213ENST00000576407 IQSEC3Q9UPP2 1182 aaPredicted RBP10.44□□□□□ -0.74
PRPF8-213ENST00000576407 UTRNP46939 3433 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 ECE2O60344 883 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 UQCRFS1P1P0C7P4 283 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 ATP5JP18859 108 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 RASGRF1Q13972 1273 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 SCARF1Q14162 830 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 PODNQ7Z5L7 613 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 NIM1KQ8IY84 436 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 JDP2Q8WYK2 163 aa10.43□□□□□ -0.74
PRPF8-213ENST00000576407 SBF1O95248 1867 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 CCDC88AQ3V6T2 1871 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 YDJCA8MPS7 323 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 SEMA3EO15041 775 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 ZBTB22O15209 634 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
PRPF8-213ENST00000576407 MCAMP43121 646 aa10.42□□□□□ -0.74
PRPF8-213ENST00000576407 RGS3P49796 1198 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms