RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 BOLA2Q9H3K6 86 aa20.1■□□□□ 0.81
ERCC4-208ENST00000576348 PODXL2Q9NZ53 605 aa20.1■□□□□ 0.81
ERCC4-208ENST00000576348 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 C21orf2O43822 256 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 KCNA3P22001 575 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 CCDC102BQ68D86 513 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 PI4K2BQ8TCG2 481 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 EYA3Q99504 573 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 WWC3Q9ULE0 1092 aa20.09■□□□□ 0.81
ERCC4-208ENST00000576348 FRAT2O75474 233 aaPredicted RBP20.08■□□□□ 0.81
ERCC4-208ENST00000576348 GRIPAP1Q4V328 841 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 OLFM4Q6UX06 510 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 ZNF804AQ7Z570 1209 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 SLC51AQ86UW1 340 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 CNTROBQ8N137 903 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 TBC1D16Q8TBP0 767 aa20.08■□□□□ 0.81
ERCC4-208ENST00000576348 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.81
ERCC4-208ENST00000576348 G3V3G9 751 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 MAP4K4O95819 1239 aaPredicted RBP20.07■□□□□ 0.8
ERCC4-208ENST00000576348 GSPT1P15170 499 aaKnown RBP20.07■□□□□ 0.8
ERCC4-208ENST00000576348 HIBADHP31937 336 aaKnown RBP20.07■□□□□ 0.8
ERCC4-208ENST00000576348 PHKA1P46020 1223 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 GYG1P46976 350 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 BCAMP50895 628 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 DCAF8Q5TAQ9 597 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 SUPT20HQ8NEM7 779 aa20.07■□□□□ 0.8
ERCC4-208ENST00000576348 FHDC1Q9C0D6 1143 aaPredicted RBP20.07■□□□□ 0.8
ERCC4-208ENST00000576348 TAF1P21675 1872 aa20.06■□□□□ 0.8
ERCC4-208ENST00000576348 FKBP4Q02790 459 aaKnown RBP eCLIP20.06■□□□□ 0.8
ERCC4-208ENST00000576348 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
ERCC4-208ENST00000576348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.06■□□□□ 0.8
ERCC4-208ENST00000576348 GPR101Q96P66 508 aaPredicted RBP20.06■□□□□ 0.8
ERCC4-208ENST00000576348 ZC3H12CQ9C0D7 883 aaKnown RBP20.06■□□□□ 0.8
ERCC4-208ENST00000576348 BCS1LQ9Y276 419 aa20.06■□□□□ 0.8
ERCC4-208ENST00000576348 WTIPA6NIX2 430 aaPredicted RBP20.05■□□□□ 0.8
ERCC4-208ENST00000576348 SDSP20132 328 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 KLRK1P26718 216 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 NLGN2Q8NFZ4 835 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 C7orf43Q8WVR3 580 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 HAUS7Q99871 368 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 POLLQ9UGP5 575 aa20.05■□□□□ 0.8
ERCC4-208ENST00000576348 ARID4AP29374 1257 aaPredicted RBP20.04■□□□□ 0.8
ERCC4-208ENST00000576348 C15orf52Q6ZUT6 534 aaKnown RBP20.04■□□□□ 0.8
ERCC4-208ENST00000576348 EVI5LQ96CN4 794 aa20.04■□□□□ 0.8
ERCC4-208ENST00000576348 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
ERCC4-208ENST00000576348 FAM84BQ96KN1 310 aaPredicted RBP20.04■□□□□ 0.8
ERCC4-208ENST00000576348 SNRKQ9NRH2 765 aa20.04■□□□□ 0.8
ERCC4-208ENST00000576348 RIMBP2O15034 1052 aa20.03■□□□□ 0.8
ERCC4-208ENST00000576348 CDC45O75419 566 aa20.03■□□□□ 0.8
ERCC4-208ENST00000576348 WASHC4Q2M389 1173 aa20.03■□□□□ 0.8
ERCC4-208ENST00000576348 FBXO33Q7Z6M2 555 aa20.03■□□□□ 0.8
ERCC4-208ENST00000576348 IQSEC3Q9UPP2 1182 aaPredicted RBP20.03■□□□□ 0.8
ERCC4-208ENST00000576348 MED23Q9ULK4 1368 aa20.03■□□□□ 0.8
ERCC4-208ENST00000576348 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 GOLIM4O00461 696 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 SEMA3EO15041 775 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 FSD1Q9BTV5 496 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 PAG1Q9NWQ8 432 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 DENND2AQ9ULE3 1009 aa20.02■□□□□ 0.8
ERCC4-208ENST00000576348 MCAMP43121 646 aa20.01■□□□□ 0.79
ERCC4-208ENST00000576348 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
ERCC4-208ENST00000576348 SPATA5Q8NB90 893 aa20.01■□□□□ 0.79
ERCC4-208ENST00000576348 ZAP70P43403 619 aa20■□□□□ 0.79
ERCC4-208ENST00000576348 CHAF1AQ13111 956 aaPredicted RBP20■□□□□ 0.79
ERCC4-208ENST00000576348 SCARF1Q14162 830 aa20■□□□□ 0.79
ERCC4-208ENST00000576348 TTF1Q15361 905 aaPredicted RBP20■□□□□ 0.79
ERCC4-208ENST00000576348 LRRFIP1Q32MZ4 808 aaKnown RBP20■□□□□ 0.79
ERCC4-208ENST00000576348 TXNRD3Q86VQ6 643 aa20■□□□□ 0.79
ERCC4-208ENST00000576348 RTFDC1Q9BY42 306 aaPredicted RBP20■□□□□ 0.79
ERCC4-208ENST00000576348 HMG20BQ9P0W2 317 aa20■□□□□ 0.79
ERCC4-208ENST00000576348 NDUFB9Q9Y6M9 179 aa20■□□□□ 0.79
ERCC4-208ENST00000576348 LRRC37AA6NMS7 1700 aa19.99■□□□□ 0.79
ERCC4-208ENST00000576348 PI16Q6UXB8 463 aa19.99■□□□□ 0.79
ERCC4-208ENST00000576348 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
ERCC4-208ENST00000576348 COA1Q9GZY4 146 aa19.99■□□□□ 0.79
ERCC4-208ENST00000576348 DIAPH3Q9NSV4 1193 aa19.99■□□□□ 0.79
ERCC4-208ENST00000576348 SLX4Q8IY92 1834 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 HIP1O00291 1037 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 PPIP5K2O43314 1243 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 EDC3Q96F86 508 aaKnown RBP19.98■□□□□ 0.79
ERCC4-208ENST00000576348 PSMD1Q99460 953 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 IRS2Q9Y4H2 1338 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 DLEC1Q9Y238 1755 aa19.98■□□□□ 0.79
ERCC4-208ENST00000576348 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
ERCC4-208ENST00000576348 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.97■□□□□ 0.79
ERCC4-208ENST00000576348 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
ERCC4-208ENST00000576348 CD209Q9NNX6 404 aa19.97■□□□□ 0.79
ERCC4-208ENST00000576348 ARAP2Q8WZ64 1704 aa19.96■□□□□ 0.79
ERCC4-208ENST00000576348 EIF5BO60841 1220 aaKnown RBP19.96■□□□□ 0.79
ERCC4-208ENST00000576348 DOK7Q18PE1 504 aa19.96■□□□□ 0.79
ERCC4-208ENST00000576348 LARGE2Q8N3Y3 721 aa19.96■□□□□ 0.79
ERCC4-208ENST00000576348 KBTBD3Q8NAB2 608 aa19.96■□□□□ 0.79
ERCC4-208ENST00000576348 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
ERCC4-208ENST00000576348 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
ERCC4-208ENST00000576348 AOC3Q16853 763 aa19.95■□□□□ 0.78
ERCC4-208ENST00000576348 ZSCAN25Q6NSZ9 544 aa19.95■□□□□ 0.78
ERCC4-208ENST00000576348 TDRD7Q8NHU6 1098 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms