RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	CLEC11A	Q9Y240	323 aa		31.63	■■■□□ 2.65
SRRM2-223	ENST00000575701	USP17L3	A6NCW0	530 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	USP17L4	A6NCW7	530 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701		H7C1D1	291 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	RFX5	P48382	616 aa	Predicted RBP	31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	UBE4A	Q14139	1066 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	USP17L1	Q7RTZ2	530 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	CNOT7	Q9UIV1	285 aa	Known RBP	31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	IRS2	Q9Y4H2	1338 aa		31.62	■■■□□ 2.65
SRRM2-223	ENST00000575701	PLIN1	O60240	522 aa		31.61	■■■□□ 2.65
SRRM2-223	ENST00000575701	KLRK1	P26718	216 aa		31.61	■■■□□ 2.65
SRRM2-223	ENST00000575701	FBXO3	Q9UK99	471 aa		31.61	■■■□□ 2.65
SRRM2-223	ENST00000575701	RSBN1L	Q6PCB5	846 aa	Predicted RBP	31.6	■■■□□ 2.65
SRRM2-223	ENST00000575701	ZNF804A	Q7Z570	1209 aa		31.6	■■■□□ 2.65
SRRM2-223	ENST00000575701	MICALL2	Q8IY33	904 aa		31.6	■■■□□ 2.65
SRRM2-223	ENST00000575701	AGBL3	Q8NEM8	1001 aa		31.6	■■■□□ 2.65
SRRM2-223	ENST00000575701	PTPN12	Q05209	780 aa	Known RBP	31.59	■■■□□ 2.65
SRRM2-223	ENST00000575701	LRRC24	Q50LG9	513 aa		31.59	■■■□□ 2.65
SRRM2-223	ENST00000575701	METTL24	Q5JXM2	366 aa		31.59	■■■□□ 2.65
SRRM2-223	ENST00000575701	KLHDC4	Q8TBB5	520 aa		31.59	■■■□□ 2.65
SRRM2-223	ENST00000575701	EYA2	O00167	538 aa		31.58	■■■□□ 2.65
SRRM2-223	ENST00000575701	GNAI2	P04899	355 aa		31.58	■■■□□ 2.65
SRRM2-223	ENST00000575701	MS4A1	P11836	297 aa		31.58	■■■□□ 2.65
SRRM2-223	ENST00000575701	STRIP1	Q5VSL9	837 aa		31.58	■■■□□ 2.65
SRRM2-223	ENST00000575701	MYO3B	Q8WXR4	1341 aa		31.57	■■■□□ 2.64
SRRM2-223	ENST00000575701	SNAP23	O00161	211 aa		31.57	■■■□□ 2.64
SRRM2-223	ENST00000575701	MTX1	Q13505	466 aa		31.57	■■■□□ 2.64
SRRM2-223	ENST00000575701	CD209	Q9NNX6	404 aa		31.57	■■■□□ 2.64
SRRM2-223	ENST00000575701	RCAN3	Q9UKA8	241 aa		31.57	■■■□□ 2.64
SRRM2-223	ENST00000575701	ZNF646	O15015	1829 aa	Predicted RBP	31.56	■■■□□ 2.64
SRRM2-223	ENST00000575701	CIAO1	O76071	339 aa		31.55	■■■□□ 2.64
SRRM2-223	ENST00000575701	PDE8B	O95263	885 aa		31.55	■■■□□ 2.64
SRRM2-223	ENST00000575701	VGLL2	Q8N8G2	317 aa		31.55	■■■□□ 2.64
SRRM2-223	ENST00000575701	DACT2	Q5SW24	774 aa		31.54	■■■□□ 2.64
SRRM2-223	ENST00000575701	ITPRIP	Q8IWB1	547 aa		31.54	■■■□□ 2.64
SRRM2-223	ENST00000575701	ZC3H15	Q8WU90	426 aa	Known RBP	31.54	■■■□□ 2.64
SRRM2-223	ENST00000575701	IL1R1	P14778	569 aa		31.53	■■■□□ 2.64
SRRM2-223	ENST00000575701	CNTROB	Q8N137	903 aa		31.53	■■■□□ 2.64
SRRM2-223	ENST00000575701	GML	Q99445	158 aa		31.53	■■■□□ 2.64
SRRM2-223	ENST00000575701	COPRS	Q9NQ92	184 aa		31.53	■■■□□ 2.64
SRRM2-223	ENST00000575701	PASK	Q96RG2	1323 aa		31.52	■■■□□ 2.64
SRRM2-223	ENST00000575701	RLBP1	P12271	317 aa		31.52	■■■□□ 2.64
SRRM2-223	ENST00000575701	MAP1S	Q66K74	1059 aa	Predicted RBP	31.52	■■■□□ 2.64
SRRM2-223	ENST00000575701	TTLL5	Q6EMB2	1281 aa		31.52	■■■□□ 2.64
SRRM2-223	ENST00000575701	FBXW7	Q969H0	707 aa		31.52	■■■□□ 2.64
SRRM2-223	ENST00000575701	SHTN1	A0MZ66	631 aa		31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	SRGAP3	O43295	1099 aa		31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	ITGBL1	O95965	494 aa	Predicted RBP	31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	MMP14	P50281	582 aa		31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	PUM3	Q15397	648 aa	Known RBP	31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	TRPM4	Q8TD43	1214 aa		31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	PGAP2	Q9UHJ9	254 aa		31.51	■■■□□ 2.63
SRRM2-223	ENST00000575701	USP17L8	P0C7I0	530 aa		31.5	■■■□□ 2.63
SRRM2-223	ENST00000575701	ZNF280A	P59817	542 aa	Predicted RBP	31.5	■■■□□ 2.63
SRRM2-223	ENST00000575701	ATG9A	Q7Z3C6	839 aa		31.5	■■■□□ 2.63
SRRM2-223	ENST00000575701	HIBADH	P31937	336 aa	Known RBP	31.49	■■■□□ 2.63
SRRM2-223	ENST00000575701	IL15	P40933	162 aa	Predicted RBP	31.49	■■■□□ 2.63
SRRM2-223	ENST00000575701	GTF2I	P78347	998 aa		31.49	■■■□□ 2.63
SRRM2-223	ENST00000575701	SAMD7	Q7Z3H4	446 aa		31.49	■■■□□ 2.63
SRRM2-223	ENST00000575701	SIL1	Q9H173	461 aa		31.49	■■■□□ 2.63
SRRM2-223	ENST00000575701	HIRA	P54198	1017 aa	Predicted RBP	31.48	■■■□□ 2.63
SRRM2-223	ENST00000575701	KIF4B	Q2VIQ3	1234 aa		31.48	■■■□□ 2.63
SRRM2-223	ENST00000575701	ZBTB7B	O15156	539 aa	Predicted RBP	31.47	■■■□□ 2.63
SRRM2-223	ENST00000575701	IFIT1	P09914	478 aa	Known RBP	31.47	■■■□□ 2.63
SRRM2-223	ENST00000575701	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.47	■■■□□ 2.63
SRRM2-223	ENST00000575701	CAVIN4	Q5BKX8	364 aa		31.47	■■■□□ 2.63
SRRM2-223	ENST00000575701	FAM84B	Q96KN1	310 aa	Predicted RBP	31.47	■■■□□ 2.63
SRRM2-223	ENST00000575701	FGFR2	P21802	821 aa		31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	GYG1	P46976	350 aa		31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	FKBP1A	P62942	108 aa	Known RBP	31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	OGFOD1	Q8N543	542 aa		31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	PANK1	Q8TE04	598 aa		31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	CEP126	Q9P2H0	1117 aa		31.46	■■■□□ 2.63
SRRM2-223	ENST00000575701	SASH1	O94885	1247 aa		31.45	■■■□□ 2.63
SRRM2-223	ENST00000575701	VPS37D	Q86XT2	251 aa		31.45	■■■□□ 2.63
SRRM2-223	ENST00000575701	TDRD7	Q8NHU6	1098 aa	Known RBP	31.45	■■■□□ 2.63
SRRM2-223	ENST00000575701	LPIN2	Q92539	896 aa		31.45	■■■□□ 2.63
SRRM2-223	ENST00000575701	PA2G4	Q9UQ80	394 aa	Known RBP	31.45	■■■□□ 2.63
SRRM2-223	ENST00000575701	SLC5A1	P13866	664 aa		31.44	■■■□□ 2.62
SRRM2-223	ENST00000575701	MYOZ2	Q9NPC6	264 aa		31.44	■■■□□ 2.62
SRRM2-223	ENST00000575701	CREBZF	Q9NS37	354 aa		31.44	■■■□□ 2.62
SRRM2-223	ENST00000575701	EGFR	P00533	1210 aa		31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	RBM26	Q5T8P6	1007 aa	Known RBP	31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	FBXO33	Q7Z6M2	555 aa		31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	MXD3	Q9BW11	206 aa		31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	HDAC9	Q9UKV0	1011 aa		31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	FAM205A	Q6ZU69	1335 aa		31.43	■■■□□ 2.62
SRRM2-223	ENST00000575701	CDC37L1	Q7L3B6	337 aa		31.41	■■■□□ 2.62
SRRM2-223	ENST00000575701	PNMA6E	A0A0J9YXQ4	647 aa		31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	TMEM88B	A6NKF7	163 aa		31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	MVP	Q14764	893 aa	Known RBP	31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	ATP2B3	Q16720	1220 aa		31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	CHMP4B	Q9H444	224 aa	Known RBP	31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	DDX19B	Q9UMR2	479 aa		31.4	■■■□□ 2.62
SRRM2-223	ENST00000575701	ARAP2	Q8WZ64	1704 aa		31.39	■■■□□ 2.62
SRRM2-223	ENST00000575701	ATP8B2	P98198	1209 aa		31.39	■■■□□ 2.62
SRRM2-223	ENST00000575701	KIAA0825	Q8IV33	1275 aa		31.39	■■■□□ 2.62
SRRM2-223	ENST00000575701	YTHDC1	Q96MU7	727 aa	Known RBP	31.39	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms