RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 KIAA1551Q9HCM1 1747 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 EIF5BO60841 1220 aaKnown RBP19.39■□□□□ 0.69
SMPD3-212ENST00000574662 MX1P20591 662 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 TTLL6Q8N841 843 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 NLGN2Q8NFZ4 835 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 XAGE2Q96GT9 111 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 WWC3Q9ULE0 1092 aa19.39■□□□□ 0.69
SMPD3-212ENST00000574662 LPIN2Q92539 896 aa19.38■□□□□ 0.69
SMPD3-212ENST00000574662 ANKIB1Q9P2G1 1089 aa19.38■□□□□ 0.69
SMPD3-212ENST00000574662 NSFL1CQ9UNZ2 370 aaKnown RBP19.38■□□□□ 0.69
SMPD3-212ENST00000574662 UBE4AQ14139 1066 aa19.37■□□□□ 0.69
SMPD3-212ENST00000574662 SNX21Q969T3 373 aa19.37■□□□□ 0.69
SMPD3-212ENST00000574662 OSBPL3Q9H4L5 887 aa19.37■□□□□ 0.69
SMPD3-212ENST00000574662 PIM2Q9P1W9 311 aa19.37■□□□□ 0.69
SMPD3-212ENST00000574662 XDHP47989 1333 aa19.36■□□□□ 0.69
SMPD3-212ENST00000574662 KLRK1P26718 216 aa19.36■□□□□ 0.69
SMPD3-212ENST00000574662 FHDC1Q9C0D6 1143 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-212ENST00000574662 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
SMPD3-212ENST00000574662 A0A1B0GUL6 1792 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 DLEC1Q9Y238 1755 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 ZNF804BA4D1E1 1349 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 C21orf2O43822 256 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 SLC5A1P13866 664 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 PI4K2BQ8TCG2 481 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 GPR101Q96P66 508 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-212ENST00000574662 ECHDC1Q9NTX5 307 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 POLLQ9UGP5 575 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 CACNA1SQ13698 1873 aa19.35■□□□□ 0.69
SMPD3-212ENST00000574662 TXNRD3Q86VQ6 643 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 LEMD3Q9Y2U8 911 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 IRS2Q9Y4H2 1338 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 IFIT1P09914 478 aaKnown RBP19.34■□□□□ 0.69
SMPD3-212ENST00000574662 KCNJ4P48050 445 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 MPNDQ8N594 471 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
SMPD3-212ENST00000574662 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.69
SMPD3-212ENST00000574662 UFL1O94874 794 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 ATP2B4P23634 1241 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 MCM4P33991 863 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 BCAMP50895 628 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 GGA1Q9UJY5 639 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 TTC41PQ6P2S7 1318 aa19.33■□□□□ 0.68
SMPD3-212ENST00000574662 GSPT1P15170 499 aaKnown RBP19.32■□□□□ 0.68
SMPD3-212ENST00000574662 PHKA1P46020 1223 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 GYG1P46976 350 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 DALRD3Q5D0E6 543 aaKnown RBP19.32■□□□□ 0.68
SMPD3-212ENST00000574662 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 FAM84BQ96KN1 310 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-212ENST00000574662 ATP5JP18859 108 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 TTC22Q5TAA0 569 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 CCDC102BQ68D86 513 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
SMPD3-212ENST00000574662 SYT17Q9BSW7 474 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 BOLA2Q9H3K6 86 aa19.32■□□□□ 0.68
SMPD3-212ENST00000574662 DDX11L8A8MPP1 907 aa19.31■□□□□ 0.68
SMPD3-212ENST00000574662 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
SMPD3-212ENST00000574662 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
SMPD3-212ENST00000574662 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-212ENST00000574662 CIZ1Q9ULV3 898 aaPredicted RBP19.31■□□□□ 0.68
SMPD3-212ENST00000574662 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
SMPD3-212ENST00000574662 AOX1Q06278 1338 aa19.31■□□□□ 0.68
SMPD3-212ENST00000574662 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
SMPD3-212ENST00000574662 GOLGB1Q14789 3259 aaKnown RBP19.3■□□□□ 0.68
SMPD3-212ENST00000574662 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
SMPD3-212ENST00000574662 SCARF1Q14162 830 aa19.3■□□□□ 0.68
SMPD3-212ENST00000574662 CCDC158Q5M9N0 1113 aa19.3■□□□□ 0.68
SMPD3-212ENST00000574662 FBXO33Q7Z6M2 555 aa19.3■□□□□ 0.68
SMPD3-212ENST00000574662 RTN4Q9NQC3 1192 aaKnown RBP19.3■□□□□ 0.68
SMPD3-212ENST00000574662 NDUFB9Q9Y6M9 179 aa19.3■□□□□ 0.68
SMPD3-212ENST00000574662 GLRX3O76003 335 aaKnown RBP19.29■□□□□ 0.68
SMPD3-212ENST00000574662 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
SMPD3-212ENST00000574662 CC2D2BQ6DHV5 1058 aa19.29■□□□□ 0.68
SMPD3-212ENST00000574662 BCS1LQ9Y276 419 aa19.29■□□□□ 0.68
SMPD3-212ENST00000574662 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
SMPD3-212ENST00000574662 ERC2O15083 957 aa19.29■□□□□ 0.68
SMPD3-212ENST00000574662 C15orf52Q6ZUT6 534 aaKnown RBP19.29■□□□□ 0.68
SMPD3-212ENST00000574662 BRCA1P38398 1863 aaKnown RBP19.28■□□□□ 0.68
SMPD3-212ENST00000574662 FAM43AQ8N2R8 423 aa19.28■□□□□ 0.68
SMPD3-212ENST00000574662 RTFDC1Q9BY42 306 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-212ENST00000574662 ARAP2Q8WZ64 1704 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 RIMBP2O15034 1052 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 CCDC93Q567U6 631 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 CAVIN4Q5BKX8 364 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 PI16Q6UXB8 463 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 EDC3Q96F86 508 aaKnown RBP19.27■□□□□ 0.68
SMPD3-212ENST00000574662 ZNF512BQ96KM6 892 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-212ENST00000574662 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
SMPD3-212ENST00000574662 IQSEC3Q9UPP2 1182 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-212ENST00000574662 SDSP20132 328 aa19.27■□□□□ 0.67
SMPD3-212ENST00000574662 PTMSP20962 102 aa19.27■□□□□ 0.67
SMPD3-212ENST00000574662 ARID4AP29374 1257 aaPredicted RBP19.27■□□□□ 0.67
SMPD3-212ENST00000574662 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.67
SMPD3-212ENST00000574662 MCAMP43121 646 aa19.27■□□□□ 0.67
SMPD3-212ENST00000574662 HAUS7Q99871 368 aa19.27■□□□□ 0.67
SMPD3-212ENST00000574662 CDC45O75419 566 aa19.26■□□□□ 0.67
SMPD3-212ENST00000574662 DDIT3P35638 169 aa19.26■□□□□ 0.67
SMPD3-212ENST00000574662 RTKN2Q8IZC4 609 aa19.26■□□□□ 0.67
SMPD3-212ENST00000574662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMPD3-212ENST00000574662 UQCRFS1P1P0C7P4 283 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms