RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.42
USP43-205ENST00000574408 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.42
USP43-205ENST00000574408 NTSR2O95665 410 aa12.45□□□□□ -0.42
USP43-205ENST00000574408 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
USP43-205ENST00000574408 SPEF2Q9C093 1822 aa12.45□□□□□ -0.42
USP43-205ENST00000574408 ZFYP08048 801 aaPredicted RBP12.45□□□□□ -0.42
USP43-205ENST00000574408 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
USP43-205ENST00000574408 ZSCAN22P10073 491 aaPredicted RBP12.44□□□□□ -0.42
USP43-205ENST00000574408 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
USP43-205ENST00000574408 CCDC152Q4G0S7 254 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP43-205ENST00000574408 PHKA1P46020 1223 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 STK3Q13188 491 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 PUM3Q15397 648 aaKnown RBP12.44□□□□□ -0.42
USP43-205ENST00000574408 ALDH8A1Q9H2A2 487 aaPredicted RBP12.44□□□□□ -0.42
USP43-205ENST00000574408 MROH5Q6ZUA9 1318 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 FGD1P98174 961 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 CCDC102BQ68D86 513 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 RREB1Q92766 1687 aa12.44□□□□□ -0.42
USP43-205ENST00000574408 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 SNAP23O00161 211 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 Q6ZUG5 572 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 GAS2L3Q86XJ1 694 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 LPIN2Q92539 896 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 HSP90B1P14625 803 aaKnown RBP12.43□□□□□ -0.42
USP43-205ENST00000574408 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 APPBP2Q92624 585 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 BICDL1Q6ZP65 573 aa12.43□□□□□ -0.42
USP43-205ENST00000574408 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP43-205ENST00000574408 VPS37CA5D8V6 355 aaPredicted RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 SLC5A1P13866 664 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 MRE11P49959 708 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 CICQ96RK0 1608 aaPredicted RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 SPATA31A6Q5VVP1 1343 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 F13A1P00488 732 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 FGFR2P21802 821 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 CLEC4GQ6UXB4 293 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 RRAGDQ9NQL2 400 aaPredicted RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 UQCRFS1P1P0C7P4 283 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 BRF1Q92994 677 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
USP43-205ENST00000574408 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
USP43-205ENST00000574408 E7EWF7 191 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 SLC9C2Q5TAH2 1124 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 NSFL1CQ9UNZ2 370 aaKnown RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 LRP5O75197 1615 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 GPAA1O43292 621 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 HAND2P61296 217 aa12.41□□□□□ -0.42
USP43-205ENST00000574408 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 LARP1BQ659C4 914 aaKnown RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 COL5A3P25940 1745 aaPredicted RBP12.41□□□□□ -0.42
USP43-205ENST00000574408 MBD3O95983 291 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
USP43-205ENST00000574408 ADD2P35612 726 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 CTNNA3Q9UI47 895 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 CNPY2Q9Y2B0 182 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 ATP6V1DQ9Y5K8 247 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 FOXP2O15409 715 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
USP43-205ENST00000574408 GNPATO15228 680 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 FGAP02671 866 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 CCNL1Q9UK58 526 aaPredicted RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 CHST3Q7LGC8 479 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 SRP68Q9UHB9 627 aaKnown RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 TCHHQ07283 1943 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
USP43-205ENST00000574408 PDCP20941 246 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 CHRNDQ07001 517 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 RASGRF1Q13972 1273 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
USP43-205ENST00000574408 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms