RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
NDE1-208ENST00000573694 ZNF541Q9H0D2 1346 aa11.77□□□□□ -0.53
NDE1-208ENST00000573694 RTL9Q8NET4 1388 aa11.77□□□□□ -0.53
NDE1-208ENST00000573694 ANP32AP39687 249 aaKnown RBP11.76□□□□□ -0.53
NDE1-208ENST00000573694 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
NDE1-208ENST00000573694 PDE1AP54750 535 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
NDE1-208ENST00000573694 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 CIAPIN1Q6FI81 312 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 CNTROBQ8N137 903 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
NDE1-208ENST00000573694 GPRC5DQ9NZD1 345 aa11.76□□□□□ -0.53
NDE1-208ENST00000573694 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
NDE1-208ENST00000573694 CACNA1SQ13698 1873 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 H7C1D1 291 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 MX1P20591 662 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 SCNN1DP51172 638 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 CXCL9Q07325 125 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 KIF1BPQ96EK5 621 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 SIL1Q9H173 461 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 ZNF609O15014 1411 aa11.75□□□□□ -0.53
NDE1-208ENST00000573694 RASSF10A6NK89 507 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
NDE1-208ENST00000573694 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 OLFM4Q6UX06 510 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 ZC3H12CQ9C0D7 883 aaKnown RBP11.74□□□□□ -0.53
NDE1-208ENST00000573694 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
NDE1-208ENST00000573694 CDC45O75419 566 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 SASH1O94885 1247 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 PCNTO95613 3336 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 SDSP20132 328 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 ECE1P42892 770 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 AOX1Q06278 1338 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 AOC3Q16853 763 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
NDE1-208ENST00000573694 TBC1D9Q6ZT07 1266 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
NDE1-208ENST00000573694 STAP2Q9UGK3 403 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
NDE1-208ENST00000573694 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 GJA3Q9Y6H8 435 aa11.73□□□□□ -0.53
NDE1-208ENST00000573694 LRRC37AA6NMS7 1700 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 XDHP47989 1333 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 MAP2K1Q02750 393 aaPredicted RBP11.72□□□□□ -0.53
NDE1-208ENST00000573694 PTPN12Q05209 780 aaKnown RBP11.72□□□□□ -0.53
NDE1-208ENST00000573694 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
NDE1-208ENST00000573694 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 ERC1Q8IUD2 1116 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 ANKRD18AQ8IVF6 992 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 AGBL3Q8NEM8 1001 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 COPRSQ9NQ92 184 aa11.72□□□□□ -0.53
NDE1-208ENST00000573694 VIL1P09327 827 aaKnown RBP11.71□□□□□ -0.53
NDE1-208ENST00000573694 MAP2K2P36507 400 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 EPS15P42566 896 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 HTRA3P83110 453 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 DEFB115Q30KQ5 88 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 TBC1D16Q8TBP0 767 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 PI4K2BQ8TCG2 481 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
NDE1-208ENST00000573694 ANKRD2Q9GZV1 360 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 GGA1Q9UJY5 639 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 LEMD3Q9Y2U8 911 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 TAF1P21675 1872 aa11.71□□□□□ -0.53
NDE1-208ENST00000573694 ARAP2Q8WZ64 1704 aa11.71□□□□□ -0.54
NDE1-208ENST00000573694 COL4A1P02462 1669 aa11.71□□□□□ -0.54
NDE1-208ENST00000573694 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 CA12O43570 354 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 CSF1RP07333 972 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 CTSWP56202 376 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 AACSQ86V21 672 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
NDE1-208ENST00000573694 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
NDE1-208ENST00000573694 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
NDE1-208ENST00000573694 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
NDE1-208ENST00000573694 CNOT7Q9UIV1 285 aaKnown RBP11.7□□□□□ -0.54
NDE1-208ENST00000573694 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
NDE1-208ENST00000573694 G3V3G9 751 aa11.69□□□□□ -0.54
NDE1-208ENST00000573694 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
NDE1-208ENST00000573694 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
NDE1-208ENST00000573694 GMPSP49915 693 aaPredicted RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
NDE1-208ENST00000573694 COL13A1Q5TAT6 717 aaPredicted RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
NDE1-208ENST00000573694 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms