RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 RASSF10A6NK89 507 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 KLRK1P26718 216 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 TXNRD3Q86VQ6 643 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 DCPSQ96C86 337 aaKnown RBP16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 COA1Q9GZY4 146 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 CNNM1Q9NRU3 951 aa16.03■□□□□ 0.16
NPLOC4-213ENST00000573519 PLIN1O60240 522 aa16.02■□□□□ 0.16
NPLOC4-213ENST00000573519 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.16
NPLOC4-213ENST00000573519 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.16
NPLOC4-213ENST00000573519 MXD3Q9BW11 206 aa16.02■□□□□ 0.16
NPLOC4-213ENST00000573519 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 SNAP23O00161 211 aa16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 USP17L8P0C7I0 530 aa16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 DLK2Q6UY11 383 aa16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 KRT26Q7Z3Y9 468 aa16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 TLL2Q9Y6L7 1015 aa16.01■□□□□ 0.15
NPLOC4-213ENST00000573519 ADM5C9JUS6 153 aa16■□□□□ 0.15
NPLOC4-213ENST00000573519 ZNF280AP59817 542 aaPredicted RBP16■□□□□ 0.15
NPLOC4-213ENST00000573519 CYP4F22Q6NT55 531 aa16■□□□□ 0.15
NPLOC4-213ENST00000573519 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
NPLOC4-213ENST00000573519 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
NPLOC4-213ENST00000573519 GGA3Q9NZ52 723 aa16■□□□□ 0.15
NPLOC4-213ENST00000573519 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 ASTN2O75129 1339 aaPredicted RBP15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 ECE1P42892 770 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 SCARF1Q14162 830 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 DACT2Q5SW24 774 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 STRIP1Q5VSL9 837 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 TTLL5Q6EMB2 1281 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 SULF1Q8IWU6 871 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 GMLQ99445 158 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 ZNF609O15014 1411 aa15.99■□□□□ 0.15
NPLOC4-213ENST00000573519 PSME4Q14997 1843 aa15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 UTYO14607 1347 aa15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 MYO3BQ8WXR4 1341 aa15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 CT47B1P0C2W7 299 aaPredicted RBP15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 GTF2IP78347 998 aa15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 ANGEL2Q5VTE6 544 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 OGFOD1Q8N543 542 aa15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 NOB1Q9ULX3 412 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-213ENST00000573519 IFFO2Q5TF58 517 aa15.97■□□□□ 0.15
NPLOC4-213ENST00000573519 ZNF804AQ7Z570 1209 aa15.97■□□□□ 0.15
NPLOC4-213ENST00000573519 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
NPLOC4-213ENST00000573519 PUS3Q9BZE2 481 aaKnown RBP15.97■□□□□ 0.15
NPLOC4-213ENST00000573519 CD209Q9NNX6 404 aa15.97■□□□□ 0.15
NPLOC4-213ENST00000573519 HNRNPUQ00839 825 aaKnown RBP eCLIP15.96■□□□□ 0.15
NPLOC4-213ENST00000573519 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
NPLOC4-213ENST00000573519 ANKRD44Q8N8A2 993 aa15.96■□□□□ 0.15
NPLOC4-213ENST00000573519 USP44Q9H0E7 712 aa15.96■□□□□ 0.15
NPLOC4-213ENST00000573519 PCNTO95613 3336 aa15.96■□□□□ 0.14
NPLOC4-213ENST00000573519 A0A1B0GUL6 1792 aa15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 FOXN1O15353 648 aa15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 HUNKP57058 714 aa15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 HDAC9Q9UKV0 1011 aa15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 SCAF8Q9UPN6 1271 aaKnown RBP15.95■□□□□ 0.14
NPLOC4-213ENST00000573519 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 AOC2O75106 756 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 SASH1O94885 1247 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 MAP2K1Q02750 393 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 NBPF9Q3BBW0 867 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 KLHDC4Q8TBB5 520 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 CDCA5Q96FF9 252 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 API5Q9BZZ5 524 aaKnown RBP15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 GBA2Q9HCG7 927 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 JAG2Q9Y219 1238 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
NPLOC4-213ENST00000573519 F8W031 263 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 BEGAINQ9BUH8 593 aa15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 ZNF646O15015 1829 aaPredicted RBP15.93■□□□□ 0.14
NPLOC4-213ENST00000573519 WNT10BO00744 389 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 UBTFL1P0CB47 393 aaPredicted RBP15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 IL1R1P14778 569 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 GYG1P46976 350 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 CTCFP49711 727 aaPredicted RBP15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 TNS4Q8IZW8 715 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 HHIPL1Q96JK4 782 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 RIPOR2Q9Y4F9 1068 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 PITPNM2Q9BZ72 1349 aa15.92■□□□□ 0.14
NPLOC4-213ENST00000573519 HIBADHP31937 336 aaKnown RBP15.91■□□□□ 0.14
NPLOC4-213ENST00000573519 THSD7BQ9C0I4 1608 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 MAP2K2P36507 400 aa15.9■□□□□ 0.14
NPLOC4-213ENST00000573519 MMP14P50281 582 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms