RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
CHMP6-203ENST00000572525 NBPF9Q3BBW0 867 aa13.25□□□□□ -0.29
CHMP6-203ENST00000572525 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
CHMP6-203ENST00000572525 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CHMP6-203ENST00000572525 OGFOD1Q8N543 542 aa13.25□□□□□ -0.29
CHMP6-203ENST00000572525 LMOD3Q0VAK6 560 aa13.24□□□□□ -0.29
CHMP6-203ENST00000572525 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
CHMP6-203ENST00000572525 CNGB1Q14028 1251 aaPredicted RBP13.23□□□□□ -0.29
CHMP6-203ENST00000572525 DACT2Q5SW24 774 aa13.23□□□□□ -0.29
CHMP6-203ENST00000572525 STRIP1Q5VSL9 837 aa13.23□□□□□ -0.29
CHMP6-203ENST00000572525 OTUD7BQ6GQQ9 843 aa13.23□□□□□ -0.29
CHMP6-203ENST00000572525 ZBTB38Q8NAP3 1195 aaPredicted RBP13.23□□□□□ -0.29
CHMP6-203ENST00000572525 TMEM106CQ9BVX2 250 aa13.23□□□□□ -0.29
CHMP6-203ENST00000572525 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
CHMP6-203ENST00000572525 ARHGEF6Q15052 776 aa13.22□□□□□ -0.29
CHMP6-203ENST00000572525 CCDC152Q4G0S7 254 aa13.22□□□□□ -0.29
CHMP6-203ENST00000572525 ZBED3Q96IU2 234 aaPredicted RBP13.22□□□□□ -0.29
CHMP6-203ENST00000572525 ZNF333Q96JL9 665 aa13.22□□□□□ -0.29
CHMP6-203ENST00000572525 EFCC1Q9HA90 598 aa13.22□□□□□ -0.29
CHMP6-203ENST00000572525 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
CHMP6-203ENST00000572525 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
CHMP6-203ENST00000572525 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
CHMP6-203ENST00000572525 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
CHMP6-203ENST00000572525 PRAMEF18Q5VWM3 479 aa13.21□□□□□ -0.29
CHMP6-203ENST00000572525 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
CHMP6-203ENST00000572525 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
CHMP6-203ENST00000572525 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
CHMP6-203ENST00000572525 A0A1B0GUL6 1792 aa13.21□□□□□ -0.29
CHMP6-203ENST00000572525 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
CHMP6-203ENST00000572525 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP6-203ENST00000572525 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
CHMP6-203ENST00000572525 PDE8AO60658 829 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 SP3Q02447 781 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 SLC10A4Q96EP9 437 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 ANGEL1Q9UNK9 670 aaKnown RBP13.2□□□□□ -0.3
CHMP6-203ENST00000572525 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
CHMP6-203ENST00000572525 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 CHL1O00533 1208 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
CHMP6-203ENST00000572525 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 ANKRD18AQ8IVF6 992 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 CD99L2Q8TCZ2 262 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
CHMP6-203ENST00000572525 RIPK4P57078 832 aa13.18□□□□□ -0.3
CHMP6-203ENST00000572525 CRHR2Q13324 411 aa13.18□□□□□ -0.3
CHMP6-203ENST00000572525 MTMR14Q8NCE2 650 aa13.18□□□□□ -0.3
CHMP6-203ENST00000572525 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
CHMP6-203ENST00000572525 SCAF8Q9UPN6 1271 aaKnown RBP13.18□□□□□ -0.3
CHMP6-203ENST00000572525 ARAP2Q8WZ64 1704 aa13.18□□□□□ -0.3
CHMP6-203ENST00000572525 CACNA1FO60840 1977 aa13.18□□□□□ -0.3
CHMP6-203ENST00000572525 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
CHMP6-203ENST00000572525 BSDC1Q9NW68 430 aaPredicted RBP13.17□□□□□ -0.3
CHMP6-203ENST00000572525 LAMA3Q16787 3333 aa13.17□□□□□ -0.3
CHMP6-203ENST00000572525 ZNF804BA4D1E1 1349 aa13.16□□□□□ -0.3
CHMP6-203ENST00000572525 SASH1O94885 1247 aa13.16□□□□□ -0.3
CHMP6-203ENST00000572525 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CHMP6-203ENST00000572525 SLC9C1Q4G0N8 1177 aa13.16□□□□□ -0.3
CHMP6-203ENST00000572525 RTL5Q5HYW3 569 aaPredicted RBP13.16□□□□□ -0.3
CHMP6-203ENST00000572525 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
CHMP6-203ENST00000572525 H0YGN5 161 aa13.15□□□□□ -0.3
CHMP6-203ENST00000572525 DLL1O00548 723 aa13.15□□□□□ -0.3
CHMP6-203ENST00000572525 CCT4P50991 539 aaKnown RBP13.15□□□□□ -0.3
CHMP6-203ENST00000572525 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
CHMP6-203ENST00000572525 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
CHMP6-203ENST00000572525 ZSWIM8A7E2V4 1837 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 GNRH1P01148 92 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 IREB2P48200 963 aaKnown RBP13.14□□□□□ -0.31
CHMP6-203ENST00000572525 PRMT2P55345 433 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 PRKG1Q13976 671 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 CLMNQ96JQ2 1002 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
CHMP6-203ENST00000572525 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 MGAMO43451 1857 aa13.14□□□□□ -0.31
CHMP6-203ENST00000572525 CAP1Q01518 475 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
CHMP6-203ENST00000572525 PTPN18Q99952 460 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
CHMP6-203ENST00000572525 PTCH2Q9Y6C5 1203 aa13.13□□□□□ -0.31
CHMP6-203ENST00000572525 GJA5P36382 358 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 CTSWP56202 376 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 FKBP1AP62942 108 aaKnown RBP13.12□□□□□ -0.31
CHMP6-203ENST00000572525 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 UNC80Q8N2C7 3258 aa13.12□□□□□ -0.31
CHMP6-203ENST00000572525 MYO1BO43795 1136 aa13.11□□□□□ -0.31
CHMP6-203ENST00000572525 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms