RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 METTL24Q5JXM2 366 aa28.48■■■□□ 2.15
SLC12A4-205ENST00000570616 SMC1BQ8NDV3 1235 aa28.48■■■□□ 2.15
SLC12A4-205ENST00000570616 ZBTB7BO15156 539 aaPredicted RBP28.47■■■□□ 2.15
SLC12A4-205ENST00000570616 PNMA8AQ86V59 439 aaPredicted RBP28.47■■■□□ 2.15
SLC12A4-205ENST00000570616 VGLL2Q8N8G2 317 aa28.47■■■□□ 2.15
SLC12A4-205ENST00000570616 ZNF609O15014 1411 aa28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 SRGAP3O43295 1099 aa28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 CIAO1O76071 339 aa28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 VIL1P09327 827 aaKnown RBP28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 RPS12P25398 132 aaKnown RBP28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 EPS15P42566 896 aa28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 COPRSQ9NQ92 184 aa28.46■■■□□ 2.15
SLC12A4-205ENST00000570616 PDE8BO95263 885 aa28.45■■■□□ 2.14
SLC12A4-205ENST00000570616 LDHDQ86WU2 507 aa28.45■■■□□ 2.14
SLC12A4-205ENST00000570616 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.45■■■□□ 2.14
SLC12A4-205ENST00000570616 DPF2Q92785 391 aa28.45■■■□□ 2.14
SLC12A4-205ENST00000570616 USP17L3A6NCW0 530 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 USP17L4A6NCW7 530 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 USP17L1Q7RTZ2 530 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 ATG9AQ7Z3C6 839 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 ZNF804AQ7Z570 1209 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 ZBTB12Q9Y330 459 aaPredicted RBP28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 SCN9AQ15858 1988 aa28.44■■■□□ 2.14
SLC12A4-205ENST00000570616 POTEIP0CG38 1075 aa28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 POTEJP0CG39 1038 aa28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 MVPQ14764 893 aaKnown RBP28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 EAPPQ56P03 285 aaPredicted RBP28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 CD209Q9NNX6 404 aa28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 ADARB2Q9NS39 739 aaKnown RBP28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 PA2G4Q9UQ80 394 aaKnown RBP28.43■■■□□ 2.14
SLC12A4-205ENST00000570616 RSBN1LQ6PCB5 846 aaPredicted RBP28.42■■■□□ 2.14
SLC12A4-205ENST00000570616 SIL1Q9H173 461 aa28.42■■■□□ 2.14
SLC12A4-205ENST00000570616 PUM3Q15397 648 aaKnown RBP28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 CHADLQ6NUI6 762 aa28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 USP50Q70EL3 339 aaPredicted RBP28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 MICALL2Q8IY33 904 aa28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 AGBL3Q8NEM8 1001 aa28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 CNOT7Q9UIV1 285 aaKnown RBP28.41■■■□□ 2.14
SLC12A4-205ENST00000570616 ADAMTSL1Q8N6G6 1762 aa28.4■■■□□ 2.14
SLC12A4-205ENST00000570616 PNMA6EA0A0J9YXQ4 647 aa28.4■■■□□ 2.14
SLC12A4-205ENST00000570616 IL15P40933 162 aaPredicted RBP28.4■■■□□ 2.14
SLC12A4-205ENST00000570616 PDE3AQ14432 1141 aa28.4■■■□□ 2.14
SLC12A4-205ENST00000570616 STRIP1Q5VSL9 837 aa28.4■■■□□ 2.14
SLC12A4-205ENST00000570616 H7C1D1 291 aa28.39■■■□□ 2.14
SLC12A4-205ENST00000570616 IL1R1P14778 569 aa28.39■■■□□ 2.14
SLC12A4-205ENST00000570616 DACT2Q5SW24 774 aa28.39■■■□□ 2.14
SLC12A4-205ENST00000570616 C1orf115Q9H7X2 142 aa28.39■■■□□ 2.14
SLC12A4-205ENST00000570616 DDX19BQ9UMR2 479 aa28.39■■■□□ 2.14
SLC12A4-205ENST00000570616 FGFR2P21802 821 aa28.38■■■□□ 2.13
SLC12A4-205ENST00000570616 COG6Q9Y2V7 657 aa28.38■■■□□ 2.13
SLC12A4-205ENST00000570616 PSME4Q14997 1843 aa28.38■■■□□ 2.13
SLC12A4-205ENST00000570616 SHTN1A0MZ66 631 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 HSPA6P17066 643 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 POLA2Q14181 598 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 GMLQ99445 158 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 CEP126Q9P2H0 1117 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 MYO3BQ8WXR4 1341 aa28.37■■■□□ 2.13
SLC12A4-205ENST00000570616 IFIT1P09914 478 aaKnown RBP28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 HIBADHP31937 336 aaKnown RBP28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 GYG1P46976 350 aa28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 ATP8B2P98198 1209 aa28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 TTLL5Q6EMB2 1281 aa28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 FBXW7Q969H0 707 aa28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 FAM84BQ96KN1 310 aaPredicted RBP28.36■■■□□ 2.13
SLC12A4-205ENST00000570616 TRPM4Q8TD43 1214 aa28.35■■■□□ 2.13
SLC12A4-205ENST00000570616 SSH3Q8TE77 659 aa28.35■■■□□ 2.13
SLC12A4-205ENST00000570616 LPIN2Q92539 896 aa28.35■■■□□ 2.13
SLC12A4-205ENST00000570616 CLEC11AQ9Y240 323 aa28.35■■■□□ 2.13
SLC12A4-205ENST00000570616 SLC5A1P13866 664 aa28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 GTF2IP78347 998 aa28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 CAVIN4Q5BKX8 364 aa28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 C20orf194Q5TEA3 1177 aa28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 FBXO33Q7Z6M2 555 aa28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 TDRD7Q8NHU6 1098 aaKnown RBP28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 CHMP4BQ9H444 224 aaKnown RBP28.34■■■□□ 2.13
SLC12A4-205ENST00000570616 ZNF280AP59817 542 aaPredicted RBP28.33■■■□□ 2.13
SLC12A4-205ENST00000570616 USP17L8P0C7I0 530 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 ATP2B3Q16720 1220 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 CEP85Q6P2H3 762 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 VPS37DQ86XT2 251 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 MXD3Q9BW11 206 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 ZBTB40Q9NUA8 1239 aa28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 ZNF646O15015 1829 aaPredicted RBP28.32■■■□□ 2.12
SLC12A4-205ENST00000570616 SASH1O94885 1247 aa28.31■■■□□ 2.12
SLC12A4-205ENST00000570616 HIRAP54198 1017 aaPredicted RBP28.31■■■□□ 2.12
SLC12A4-205ENST00000570616 SAMD7Q7Z3H4 446 aa28.31■■■□□ 2.12
SLC12A4-205ENST00000570616 FAM205AQ6ZU69 1335 aa28.3■■■□□ 2.12
SLC12A4-205ENST00000570616 FKBP1AP62942 108 aaKnown RBP28.3■■■□□ 2.12
SLC12A4-205ENST00000570616 MAP1SQ66K74 1059 aaPredicted RBP28.3■■■□□ 2.12
SLC12A4-205ENST00000570616 ZC3H15Q8WU90 426 aaKnown RBP28.3■■■□□ 2.12
SLC12A4-205ENST00000570616 G3BP1Q13283 466 aaKnown RBP eCLIP28.29■■■□□ 2.12
SLC12A4-205ENST00000570616 KIF4BQ2VIQ3 1234 aa28.29■■■□□ 2.12
SLC12A4-205ENST00000570616 TBC1D10BQ4KMP7 808 aaPredicted RBP28.29■■■□□ 2.12
SLC12A4-205ENST00000570616 CNTROBQ8N137 903 aa28.29■■■□□ 2.12
SLC12A4-205ENST00000570616 PGAP2Q9UHJ9 254 aa28.29■■■□□ 2.12
SLC12A4-205ENST00000570616 EGFRP00533 1210 aa28.28■■■□□ 2.12
SLC12A4-205ENST00000570616 MMP14P50281 582 aa28.28■■■□□ 2.12
SLC12A4-205ENST00000570616 BCAMP50895 628 aa28.28■■■□□ 2.12
SLC12A4-205ENST00000570616 APLP1P51693 650 aa28.28■■■□□ 2.12
SLC12A4-205ENST00000570616 RRP1P56182 461 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms