RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 APBA3O96018 575 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 CASP7P55210 303 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 SLC27A3Q5K4L6 730 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
GDE1-205ENST00000569899 UBN2Q6ZU65 1347 aa12.45□□□□□ -0.42
GDE1-205ENST00000569899 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 RTL5Q5HYW3 569 aaPredicted RBP12.44□□□□□ -0.42
GDE1-205ENST00000569899 PLSCR1O15162 318 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 NLRP10Q86W26 655 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
GDE1-205ENST00000569899 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
GDE1-205ENST00000569899 H7C1W4 665 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 RGS3P49796 1198 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
GDE1-205ENST00000569899 MTX1Q13505 466 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 ZNF34Q8IZ26 560 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
GDE1-205ENST00000569899 SPEF2Q9C093 1822 aa12.43□□□□□ -0.42
GDE1-205ENST00000569899 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
GDE1-205ENST00000569899 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
GDE1-205ENST00000569899 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
GDE1-205ENST00000569899 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
GDE1-205ENST00000569899 PCCAP05165 728 aaPredicted RBP12.41□□□□□ -0.42
GDE1-205ENST00000569899 NUCB1Q02818 461 aa12.41□□□□□ -0.42
GDE1-205ENST00000569899 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
GDE1-205ENST00000569899 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
GDE1-205ENST00000569899 EXOC6BQ9Y2D4 811 aa12.41□□□□□ -0.42
GDE1-205ENST00000569899 ZNF652Q9Y2D9 606 aa12.41□□□□□ -0.42
GDE1-205ENST00000569899 APBB1O00213 710 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 SYNE4Q8N205 404 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 FAM89AQ96GI7 184 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 FAM217BQ9NTX9 383 aaPredicted RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 NIP7Q9Y221 180 aaKnown RBP eCLIP12.4□□□□□ -0.42
GDE1-205ENST00000569899 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
GDE1-205ENST00000569899 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 FOXO4P98177 505 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 ANKRD45Q5TZF3 282 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 CHD1LQ86WJ1 897 aa12.4□□□□□ -0.42
GDE1-205ENST00000569899 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
GDE1-205ENST00000569899 SMARCA5O60264 1052 aaPredicted RBP12.39□□□□□ -0.43
GDE1-205ENST00000569899 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
GDE1-205ENST00000569899 CLEC4GQ6UXB4 293 aa12.39□□□□□ -0.43
GDE1-205ENST00000569899 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
GDE1-205ENST00000569899 PA2G4Q9UQ80 394 aaKnown RBP12.39□□□□□ -0.43
GDE1-205ENST00000569899 LRP5O75197 1615 aa12.39□□□□□ -0.43
GDE1-205ENST00000569899 ZPR1O75312 459 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 NTSR2O95665 410 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 SSFA2P28290 1259 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
GDE1-205ENST00000569899 RFC4P35249 363 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 PARP10Q53GL7 1025 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 LMBR1LQ6UX01 489 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 SAMD7Q7Z3H4 446 aa12.38□□□□□ -0.43
GDE1-205ENST00000569899 SURF6O75683 361 aaKnown RBP12.37□□□□□ -0.43
GDE1-205ENST00000569899 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
GDE1-205ENST00000569899 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 BCL11AQ9H165 835 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 TAF1P21675 1872 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 IRS4O14654 1257 aaPredicted RBP12.37□□□□□ -0.43
GDE1-205ENST00000569899 RFX5P48382 616 aaPredicted RBP12.37□□□□□ -0.43
GDE1-205ENST00000569899 CAMKK2Q96RR4 588 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
GDE1-205ENST00000569899 PLA2G12BQ9BX93 195 aa12.37□□□□□ -0.43
GDE1-205ENST00000569899 COL4A1P02462 1669 aa12.36□□□□□ -0.43
GDE1-205ENST00000569899 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
GDE1-205ENST00000569899 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
GDE1-205ENST00000569899 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
GDE1-205ENST00000569899 SIL1Q9H173 461 aa12.36□□□□□ -0.43
GDE1-205ENST00000569899 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 DDX11L8A8MPP1 907 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 CTSWP56202 376 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 OTUD7AQ8TE49 926 aaPredicted RBP12.35□□□□□ -0.43
GDE1-205ENST00000569899 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
GDE1-205ENST00000569899 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 NOP58Q9Y2X3 529 aaKnown RBP12.35□□□□□ -0.43
GDE1-205ENST00000569899 NRXN2Q9P2S2 1712 aa12.35□□□□□ -0.43
GDE1-205ENST00000569899 GYS1P13807 737 aa12.34□□□□□ -0.43
GDE1-205ENST00000569899 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
GDE1-205ENST00000569899 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms