RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 INO80BQ9C086 356 aaPredicted RBP7.88□□□□□ -1.15
SMG1-217ENST00000569764 GJA3Q9Y6H8 435 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 GRM1Q13255 1194 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 FHDC1Q9C0D6 1143 aaPredicted RBP7.88□□□□□ -1.15
SMG1-217ENST00000569764 PIF1Q9H611 641 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 NIP7Q9Y221 180 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMG1-217ENST00000569764 STRCP1A6NGW2 1772 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 FAM177BA6PVY3 158 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 NPR1P16066 1061 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 TNFAIP1Q13829 316 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 TCEAL1Q15170 157 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 CCDC152Q4G0S7 254 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 PANK1Q8TE04 598 aa7.88□□□□□ -1.15
SMG1-217ENST00000569764 UTP14AQ9BVJ6 771 aaKnown RBP7.88□□□□□ -1.15
SMG1-217ENST00000569764 SOS1Q07889 1333 aaPredicted RBP7.88□□□□□ -1.15
SMG1-217ENST00000569764 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 PRKAR2BP31323 418 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 ARMC3Q5W041 872 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 HYPKQ9NX55 129 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 ANKIB1Q9P2G1 1089 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 RARSP54136 660 aaKnown RBP7.87□□□□□ -1.15
SMG1-217ENST00000569764 SLC4A8Q2Y0W8 1093 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 SDE2Q6IQ49 451 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 MASTLQ96GX5 879 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 SYT17Q9BSW7 474 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 CENPOQ9BU64 300 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 ANKRD2Q9GZV1 360 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 TRMT112Q9UI30 125 aaKnown RBP7.87□□□□□ -1.15
SMG1-217ENST00000569764 RGPD1P0DJD0 1748 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 NAT1P18440 290 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 FAM182BQ5T319 152 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 ZNF219Q9P2Y4 722 aaPredicted RBP7.87□□□□□ -1.15
SMG1-217ENST00000569764 SWAP70Q9UH65 585 aa7.87□□□□□ -1.15
SMG1-217ENST00000569764 TOMM70O94826 608 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 CCDC47Q96A33 483 aaKnown RBP7.86□□□□□ -1.15
SMG1-217ENST00000569764 IRF2BPLQ9H1B7 796 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 SMC3Q9UQE7 1217 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 IL6STP40189 918 aaPredicted RBP7.86□□□□□ -1.15
SMG1-217ENST00000569764 RBM5P52756 815 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG1-217ENST00000569764 DCTN1Q14203 1278 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 CCDC92Q53HC0 331 aaPredicted RBP7.86□□□□□ -1.15
SMG1-217ENST00000569764 ARMC9Q7Z3E5 817 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 KCNB2Q92953 911 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 CAMKK2Q96RR4 588 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 GOLGA6L22H0YM25 854 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 SERPINB2P05120 415 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 ANP32AP39687 249 aaKnown RBP7.86□□□□□ -1.15
SMG1-217ENST00000569764 RIPK4P57078 832 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 PSMD2Q13200 908 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
SMG1-217ENST00000569764 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
SMG1-217ENST00000569764 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 LDHCP07864 332 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 POU5F1Q01860 360 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 EIF4A2Q14240 407 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 LONRF1Q17RB8 773 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 PPP4R4Q6NUP7 873 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 PDCL3Q9H2J4 239 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 HACL1Q9UJ83 578 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 HMMRO75330 724 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 IGHDP01880 384 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 HOXD10P28358 340 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 ZKSCAN8Q15776 578 aaPredicted RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 NFE2L2Q16236 605 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 C10orf62Q5T681 223 aaPredicted RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 C16orf87Q6PH81 154 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 DPP8Q6V1X1 898 aaPredicted RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 USHBP1Q8N6Y0 703 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 CEP89Q96ST8 783 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 PPCSQ9HAB8 311 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 COL4A3BPQ9Y5P4 624 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 MAST3O60307 1309 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 PPP1R12BO60237 982 aaPredicted RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 BBOX1O75936 387 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 ABL2P42684 1182 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 WDR63Q8IWG1 891 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 ZBTB9Q96C00 473 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 TBC1D2Q9BYX2 928 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 RAI14Q9P0K7 980 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 RGS12O14924 1447 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 EIF3JO75822 258 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 LDHAP00338 332 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 CD53P19397 219 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 CAVIN4Q5BKX8 364 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 CHCHD4Q8N4Q1 142 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 TMEM106CQ9BVX2 250 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 BRIP1Q9BX63 1249 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 RBM28Q9NW13 759 aaKnown RBP7.85□□□□□ -1.15
SMG1-217ENST00000569764 COG6Q9Y2V7 657 aa7.85□□□□□ -1.15
SMG1-217ENST00000569764 IGSF1Q8N6C5 1336 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 CAPN15O75808 1086 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 FLT3P36888 993 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 TSPYL6Q8N831 410 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 GLMNQ92990 594 aa7.84□□□□□ -1.15
SMG1-217ENST00000569764 ANAPC4Q9UJX5 808 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms