RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-217ENST00000569338 PEAR1Q5VY43 1037 aaPredicted RBP7.52□□□□□ -1.21
BBS4-217ENST00000569338 GDF6Q6KF10 455 aaPredicted RBP7.52□□□□□ -1.21
BBS4-217ENST00000569338 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
BBS4-217ENST00000569338 PRDM6Q9NQX0 595 aa7.52□□□□□ -1.21
BBS4-217ENST00000569338 DZANK1Q9NVP4 752 aa7.52□□□□□ -1.21
BBS4-217ENST00000569338 TRIM33Q9UPN9 1127 aa7.52□□□□□ -1.21
BBS4-217ENST00000569338 DCAF1Q9Y4B6 1507 aa7.52□□□□□ -1.21
BBS4-217ENST00000569338 SHROOM4Q9ULL8 1493 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 PIK3R2O00459 728 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 LDHBP07195 334 aaKnown RBP7.51□□□□□ -1.21
BBS4-217ENST00000569338 ALG1LQ6GMV1 187 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 BEND7Q8N7W2 519 aaPredicted RBP7.51□□□□□ -1.21
BBS4-217ENST00000569338 EPS8L3Q8TE67 593 aaKnown RBP7.51□□□□□ -1.21
BBS4-217ENST00000569338 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 NLRP2Q9NX02 1062 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 WWC3Q9ULE0 1092 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 CNTNAP5Q8WYK1 1306 aa7.51□□□□□ -1.21
BBS4-217ENST00000569338 A0A1W2PP55 124 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 NFKBIEO00221 500 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 PDE2AO00408 941 aaPredicted RBP7.5□□□□□ -1.21
BBS4-217ENST00000569338 GADD45BO75293 160 aaPredicted RBP7.5□□□□□ -1.21
BBS4-217ENST00000569338 IRS1P35568 1242 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 KIAA0319Q5VV43 1072 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 LINC00114Q6XXX2 140 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
BBS4-217ENST00000569338 POP1Q99575 1024 aaKnown RBP7.5□□□□□ -1.21
BBS4-217ENST00000569338 LACRTQ9GZZ8 138 aa7.5□□□□□ -1.21
BBS4-217ENST00000569338 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 GNB5O14775 395 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 NID1P14543 1247 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 FGD1P98174 961 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 GRIK5Q16478 980 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 TMEM102Q8N9M5 508 aaPredicted RBP7.49□□□□□ -1.21
BBS4-217ENST00000569338 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 HHIPQ96QV1 700 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 EHD4Q9H223 541 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 LIN7BQ9HAP6 207 aa7.49□□□□□ -1.21
BBS4-217ENST00000569338 PTPRAP18433 802 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
BBS4-217ENST00000569338 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.48□□□□□ -1.21
BBS4-217ENST00000569338 MSL1Q68DK7 614 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 WFDC8Q8IUA0 241 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 IL22RA1Q8N6P7 574 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 ASAP3Q8TDY4 903 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 NXPE3Q969Y0 559 aa7.48□□□□□ -1.21
BBS4-217ENST00000569338 PRPF40AO75400 957 aaKnown RBP7.47□□□□□ -1.21
BBS4-217ENST00000569338 TRAPPC3LQ5T215 181 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 FBXO33Q7Z6M2 555 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 DMRTC2Q8IXT2 367 aaPredicted RBP7.47□□□□□ -1.21
BBS4-217ENST00000569338 CACTIN-AS1Q8N1I8 211 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 BCL2L13Q9BXK5 485 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 SUV39H2Q9H5I1 410 aa7.47□□□□□ -1.21
BBS4-217ENST00000569338 SPDYE3A6NKU9 549 aa7.46□□□□□ -1.22
BBS4-217ENST00000569338 CDC27P30260 824 aa7.46□□□□□ -1.22
BBS4-217ENST00000569338 BHLHE41Q9C0J9 482 aaPredicted RBP7.46□□□□□ -1.22
BBS4-217ENST00000569338 USP35Q9P2H5 1018 aa7.46□□□□□ -1.22
BBS4-217ENST00000569338 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
BBS4-217ENST00000569338 METTL12A8MUP2 240 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 BAG6P46379 1132 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 GRM2Q14416 872 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 ADAMTSL4Q6UY14 1074 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 CCNJLQ8IV13 435 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 TCF12Q99081 682 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 DUSP9Q99956 384 aaKnown RBP7.45□□□□□ -1.22
BBS4-217ENST00000569338 BCO2Q9BYV7 579 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 ADAM19Q9H013 955 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 SH2B1Q9NRF2 756 aaPredicted RBP7.45□□□□□ -1.22
BBS4-217ENST00000569338 PPP4R2Q9NY27 417 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 NOP53Q9NZM5 478 aaKnown RBP7.45□□□□□ -1.22
BBS4-217ENST00000569338 TRAK1Q9UPV9 953 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 PPME1Q9Y570 386 aa7.45□□□□□ -1.22
BBS4-217ENST00000569338 RBM47A0AV96 593 aaKnown RBP7.44□□□□□ -1.22
BBS4-217ENST00000569338 RNF225M0QZC1 329 aaPredicted RBP7.44□□□□□ -1.22
BBS4-217ENST00000569338 CDC25BP30305 580 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 CABP4P57796 275 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
BBS4-217ENST00000569338 NXPE4Q6UWF7 544 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 GIPC2Q8TF65 315 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 MUC3BQ9H195 1237 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
BBS4-217ENST00000569338 A0A096LPE4 126 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 A0A1W2PPZ6 126 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 EPHA1P21709 976 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 GRIA4P48058 902 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 XPCQ01831 940 aaPredicted RBP7.43□□□□□ -1.22
BBS4-217ENST00000569338 TRIM28Q13263 835 aaKnown RBP7.43□□□□□ -1.22
BBS4-217ENST00000569338 SPRED3Q2MJR0 410 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
BBS4-217ENST00000569338 TXNDC11Q6PKC3 985 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 KIAA1522Q9P206 1035 aaPredicted RBP7.43□□□□□ -1.22
BBS4-217ENST00000569338 SOX13Q9UN79 622 aa7.43□□□□□ -1.22
BBS4-217ENST00000569338 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
BBS4-217ENST00000569338 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
BBS4-217ENST00000569338 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms