RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 CNKSR1Q969H4 720 aa12.91□□□□□ -0.34
CDH3-210ENST00000569117 MPHOSPH8Q99549 860 aa12.91□□□□□ -0.34
CDH3-210ENST00000569117 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
CDH3-210ENST00000569117 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
CDH3-210ENST00000569117 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
CDH3-210ENST00000569117 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
CDH3-210ENST00000569117 BBOX1O75936 387 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 DPEP1P16444 411 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 KCNA3P22001 575 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDH3-210ENST00000569117 OS9Q13438 667 aaPredicted RBP12.9□□□□□ -0.34
CDH3-210ENST00000569117 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
CDH3-210ENST00000569117 VGLL2Q8N8G2 317 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 KIF1BPQ96EK5 621 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 RIPOR2Q9Y4F9 1068 aa12.9□□□□□ -0.34
CDH3-210ENST00000569117 MROH5Q6ZUA9 1318 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 MAP3K13O43283 966 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 SASH1O94885 1247 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 RHPN1Q8TCX5 695 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDH3-210ENST00000569117 LRRCC1Q9C099 1032 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
CDH3-210ENST00000569117 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
CDH3-210ENST00000569117 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
CDH3-210ENST00000569117 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
CDH3-210ENST00000569117 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
CDH3-210ENST00000569117 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
CDH3-210ENST00000569117 NLGN2Q8NFZ4 835 aa12.88□□□□□ -0.35
CDH3-210ENST00000569117 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
CDH3-210ENST00000569117 NUCB1Q02818 461 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 CHRNDQ07001 517 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 TFCP2Q12800 502 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 GPR108Q9NPR9 543 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 MINPP1Q9UNW1 487 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 XDHP47989 1333 aa12.87□□□□□ -0.35
CDH3-210ENST00000569117 APBB1O00213 710 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 PDE8BO95263 885 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
CDH3-210ENST00000569117 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
CDH3-210ENST00000569117 MYH13Q9UKX3 1938 aa12.86□□□□□ -0.35
CDH3-210ENST00000569117 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
CDH3-210ENST00000569117 TNNI3KQ59H18 835 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 ANKRD45Q5TZF3 282 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 CLASRPQ8N2M8 674 aaKnown RBP12.85□□□□□ -0.35
CDH3-210ENST00000569117 SYT17Q9BSW7 474 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 FPGT-TNNI3KV9GXZ4 949 aa12.85□□□□□ -0.35
CDH3-210ENST00000569117 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
CDH3-210ENST00000569117 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
CDH3-210ENST00000569117 FGFR2P21802 821 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
CDH3-210ENST00000569117 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
CDH3-210ENST00000569117 A0A1B0GUL7 405 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 GPSM2P81274 684 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
CDH3-210ENST00000569117 LPIN2Q92539 896 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
CDH3-210ENST00000569117 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 SALL3Q9BXA9 1300 aa12.83□□□□□ -0.36
CDH3-210ENST00000569117 MED23Q9ULK4 1368 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 TAF5LO75529 589 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 SLC5A1P13866 664 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 AACSQ86V21 672 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
CDH3-210ENST00000569117 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 ZNF804BA4D1E1 1349 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
CDH3-210ENST00000569117 GOLGB1Q14789 3259 aaKnown RBP12.81□□□□□ -0.36
CDH3-210ENST00000569117 C21orf2O43822 256 aa12.81□□□□□ -0.36
CDH3-210ENST00000569117 UFL1O94874 794 aa12.81□□□□□ -0.36
CDH3-210ENST00000569117 IFIT1P09914 478 aaKnown RBP12.81□□□□□ -0.36
CDH3-210ENST00000569117 ATP2B4P23634 1241 aa12.81□□□□□ -0.36
CDH3-210ENST00000569117 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
CDH3-210ENST00000569117 DPP8Q6V1X1 898 aaPredicted RBP12.81□□□□□ -0.36
CDH3-210ENST00000569117 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
CDH3-210ENST00000569117 MPNDQ8N594 471 aa12.81□□□□□ -0.36
CDH3-210ENST00000569117 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms