RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 CTSWP56202 376 aa19.22■□□□□ 0.67
USB1-214ENST00000568848 CWF19L2Q2TBE0 894 aaKnown RBP19.22■□□□□ 0.67
USB1-214ENST00000568848 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
USB1-214ENST00000568848 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
USB1-214ENST00000568848 METTL22Q9BUU2 404 aaPredicted RBP19.22■□□□□ 0.67
USB1-214ENST00000568848 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
USB1-214ENST00000568848 SNAP23O00161 211 aa19.21■□□□□ 0.67
USB1-214ENST00000568848 ZNF609O15014 1411 aa19.21■□□□□ 0.67
USB1-214ENST00000568848 ATP2B4P23634 1241 aa19.21■□□□□ 0.67
USB1-214ENST00000568848 G2E3Q7L622 706 aa19.21■□□□□ 0.67
USB1-214ENST00000568848 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
USB1-214ENST00000568848 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
USB1-214ENST00000568848 TTLL11Q8NHH1 800 aa19.2■□□□□ 0.66
USB1-214ENST00000568848 WNT10BO00744 389 aa19.19■□□□□ 0.66
USB1-214ENST00000568848 PTPN12Q05209 780 aaKnown RBP19.19■□□□□ 0.66
USB1-214ENST00000568848 KIAA0825Q8IV33 1275 aa19.19■□□□□ 0.66
USB1-214ENST00000568848 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
USB1-214ENST00000568848 HTTP42858 3142 aa19.19■□□□□ 0.66
USB1-214ENST00000568848 MYH3P11055 1940 aa19.19■□□□□ 0.66
USB1-214ENST00000568848 PI4KAP2A4QPH2 592 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 PI4KAP1Q8N8J0 262 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 IFT57Q9NWB7 429 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 AOX1Q06278 1338 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 MED23Q9ULK4 1368 aa19.18■□□□□ 0.66
USB1-214ENST00000568848 CCT4P50991 539 aaKnown RBP19.17■□□□□ 0.66
USB1-214ENST00000568848 PODNQ7Z5L7 613 aa19.17■□□□□ 0.66
USB1-214ENST00000568848 JAG2Q9Y219 1238 aa19.17■□□□□ 0.66
USB1-214ENST00000568848 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
USB1-214ENST00000568848 GPR25O00155 361 aa19.16■□□□□ 0.66
USB1-214ENST00000568848 UBE3BQ7Z3V4 1068 aa19.16■□□□□ 0.66
USB1-214ENST00000568848 CENPFP49454 3210 aa19.16■□□□□ 0.66
USB1-214ENST00000568848 GNAI1P63096 354 aa19.15■□□□□ 0.66
USB1-214ENST00000568848 FKBP1BP68106 108 aa19.15■□□□□ 0.66
USB1-214ENST00000568848 CDC5LQ99459 802 aaKnown RBP19.15■□□□□ 0.66
USB1-214ENST00000568848 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
USB1-214ENST00000568848 GTF2IP78347 998 aa19.14■□□□□ 0.65
USB1-214ENST00000568848 KSR2Q6VAB6 950 aa19.14■□□□□ 0.65
USB1-214ENST00000568848 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.65
USB1-214ENST00000568848 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.65
USB1-214ENST00000568848 BRCA2P51587 3418 aa19.13■□□□□ 0.65
USB1-214ENST00000568848 NEURL1BA8MQ27 555 aa19.13■□□□□ 0.65
USB1-214ENST00000568848 F8W031 263 aaPredicted RBP19.13■□□□□ 0.65
USB1-214ENST00000568848 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
USB1-214ENST00000568848 PRPF38BQ5VTL8 546 aaKnown RBP19.13■□□□□ 0.65
USB1-214ENST00000568848 CERS5Q8N5B7 392 aa19.13■□□□□ 0.65
USB1-214ENST00000568848 HELBQ8NG08 1087 aaPredicted RBP19.13■□□□□ 0.65
USB1-214ENST00000568848 ANGEL1Q9UNK9 670 aaKnown RBP19.13■□□□□ 0.65
USB1-214ENST00000568848 DDX58O95786 925 aaKnown RBP19.12■□□□□ 0.65
USB1-214ENST00000568848 TM4SF4P48230 202 aa19.12■□□□□ 0.65
USB1-214ENST00000568848 CCDC30Q5VVM6 783 aa19.12■□□□□ 0.65
USB1-214ENST00000568848 ZNF804BA4D1E1 1349 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 CLRN2A0PK11 232 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 TAF5LO75529 589 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 HSP90B1P14625 803 aaKnown RBP19.11■□□□□ 0.65
USB1-214ENST00000568848 CAP1Q01518 475 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 STRIP1Q5VSL9 837 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 COA1Q9GZY4 146 aa19.11■□□□□ 0.65
USB1-214ENST00000568848 ITGA6P23229 1130 aa19.1■□□□□ 0.65
USB1-214ENST00000568848 ZBED3Q96IU2 234 aaPredicted RBP19.1■□□□□ 0.65
USB1-214ENST00000568848 PRKRIP1Q9H875 184 aaPredicted RBP19.1■□□□□ 0.65
USB1-214ENST00000568848 A0A1B0GUL6 1792 aa19.1■□□□□ 0.65
USB1-214ENST00000568848 POTEFA5A3E0 1075 aa19.09■□□□□ 0.65
USB1-214ENST00000568848 H7C1W4 665 aa19.09■□□□□ 0.65
USB1-214ENST00000568848 CHRNDQ07001 517 aa19.09■□□□□ 0.65
USB1-214ENST00000568848 SPRYD7Q5W111 196 aa19.09■□□□□ 0.65
USB1-214ENST00000568848 REM2Q8IYK8 340 aaPredicted RBP19.09■□□□□ 0.65
USB1-214ENST00000568848 IGF2BP3O00425 579 aaKnown RBP eCLIP19.08■□□□□ 0.64
USB1-214ENST00000568848 FKTNO75072 461 aa19.08■□□□□ 0.64
USB1-214ENST00000568848 NF2P35240 595 aa19.08■□□□□ 0.64
USB1-214ENST00000568848 IGHMBP2P38935 993 aaKnown RBP19.08■□□□□ 0.64
USB1-214ENST00000568848 CASP7P55210 303 aa19.08■□□□□ 0.64
USB1-214ENST00000568848 LDLRAD1Q5T700 205 aa19.08■□□□□ 0.64
USB1-214ENST00000568848 FBXO46Q6PJ61 603 aaPredicted RBP19.08■□□□□ 0.64
USB1-214ENST00000568848 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.64
USB1-214ENST00000568848 IRS2Q9Y4H2 1338 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 GJA5P36382 358 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 CDAN1Q8IWY9 1227 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 DEFB129Q9H1M3 183 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 CD209Q9NNX6 404 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
USB1-214ENST00000568848 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
USB1-214ENST00000568848 KCNJ4P48050 445 aa19.06■□□□□ 0.64
USB1-214ENST00000568848 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
USB1-214ENST00000568848 GCKRQ14397 625 aa19.06■□□□□ 0.64
USB1-214ENST00000568848 APOBEC3FQ8IUX4 373 aaKnown RBP19.06■□□□□ 0.64
USB1-214ENST00000568848 LEMD3Q9Y2U8 911 aa19.06■□□□□ 0.64
USB1-214ENST00000568848 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
USB1-214ENST00000568848 SREBF2Q12772 1141 aa19.05■□□□□ 0.64
USB1-214ENST00000568848 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
USB1-214ENST00000568848 TWISTNBQ3B726 338 aaPredicted RBP19.05■□□□□ 0.64
USB1-214ENST00000568848 NBPF12Q5TAG4 269 aaPredicted RBP19.05■□□□□ 0.64
USB1-214ENST00000568848 WNK4Q96J92 1243 aa19.05■□□□□ 0.64
USB1-214ENST00000568848 ZNF594Q96JF6 807 aaPredicted RBP19.05■□□□□ 0.64
USB1-214ENST00000568848 MPHOSPH8Q99549 860 aa19.05■□□□□ 0.64
USB1-214ENST00000568848 VEZTQ9HBM0 779 aa19.05■□□□□ 0.64
USB1-214ENST00000568848 OTOFQ9HC10 1997 aa19.04■□□□□ 0.64
USB1-214ENST00000568848 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms